Set up gcc environment - 3.3
warning: **** $EMB_ROOT not set
Searching EMBOSS libraries in -R/lib -L/lib -lnucleus -lajax -lajaxg -leplplot 
Searching EMBOSS headers in 
warning: **** $EMB_VERSION not set in Makefile.PL
Checking if your kit is complete...
Looks good
Note (probably harmless): No library found for -lnucleus
Note (probably harmless): No library found for -lajax
Note (probably harmless): No library found for -lajaxg
Note (probably harmless): No library found for -leplplot
Writing Makefile for Bio::Emboss
cp Emboss.pm blib/lib/Bio/Emboss.pm
cp lib/Bio/Emboss/Methods.pm blib/lib/Bio/Emboss/Methods.pm
/export/home/cpanrun/build/5.10.0/bin/perl /export/home/cpanrun/build/5.10.0/lib/ExtUtils/xsubpp  -typemap /export/home/cpanrun/build/5.10.0/lib/ExtUtils/typemap -typemap typemap  Emboss.xs > Emboss.xsc && mv Emboss.xsc Emboss.c
gcc -c  -I.  -D_REENTRANT -DPRIVLIB_LAST_IN_INC -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -fno-strict-aliasing -pipe -O   -DVERSION=\"5.0.0.1\" -DXS_VERSION=\"5.0.0.1\" -fPIC "-I/export/home/cpanrun/build/5.10.0/lib/CORE"   Emboss.c
In file included from Emboss.xs:7:
emboss_perl.h:61:20: emboss.h: No such file or directory
make: *** [Emboss.o] Error 1