The system cannot find the path specified.

NOTICE: ** You do not have xsltproc **

This tool is not required for go-perl, but it is useful for for
certain kinds of format conversion (eg converting to OWL format). You
will also need this tool if you are installing go-db-perl

You can safely ignore this notification message; Even if you do intend
to use go-db-perl later, you can install xsltproc at a later date

xsltproc is available as part of libxslt. See http://xmlsoft.org/XSLT/
for details


NOTICE: ** You do not have BioPerl installed **

BioPerl and Digest::MD5 are required if you wish to install
AmiGO. They are also required for some applications involving
sequences.

If you don't care about these, then you can ignore this message. If
you do care about these, you can still ignore this message for now and
install both BioPerl and Digest::MD5 later on

Checking if your kit is complete...
Looks good
Writing Makefile for GO

Microsoft (R) Program Maintenance Utility   Version 6.00.8168.0
Copyright (C) Microsoft Corp 1988-1998. All rights reserved.

makefile(1748) : fatal error U1000: syntax error : ')' missing in macro invocation
Stop.