Argument "2.0.0" isn't numeric in numeric lt (<) at /home/cpanrun/pa-risc1.1/build/5.6.1/lib/5.6.1/ExtUtils/MakeMaker.pm line 339.
I will use the following settings for compiling and testing:
testdriver (default) = Pg
testdsn (default) = dbi:Pg:dbname=test
testhost (default) =
testpassword (default) =
testrecreate (default) = dropdb test; createdb test
testuser (default) =
To change these settings, see 'perl Makefile.PL --help'.
Checking if your kit is complete...
Looks good
Writing Makefile for DBIx
Could not connect to database: "dbi:Pg:dbname=test"
EITHER The required DBD driver "Pg" is not installed
OR There is no such database as "dbi:Pg:dbname=test"
COULD NOT CONNECT USING DBI->connect(dbi:Pg:dbname=test )
===================================
** WARNING **
Could not connect using these parameters; test suite will probably fail
install_driver(Pg) failed: Can't locate DBD/Pg.pm in @INC (@INC contains: t . /home/cpanrun/pa-risc1.1/build/5.6.1/lib/5.6.1/PA-RISC1.1-thread-multi /home/cpanrun/pa-risc1.1/build/5.6.1/lib/5.6.1 /home/cpanrun/pa-risc1.1/build/5.6.1/lib/site_perl/5.6.1/PA-RISC1.1-thread-multi /home/cpanrun/pa-risc1.1/build/5.6.1/lib/site_perl/5.6.1 /home/cpanrun/pa-risc1.1/build/5.6.1/lib/site_perl) at (eval 100) line 3.
Perhaps the DBD::Pg perl module hasn't been fully installed,
or perhaps the capitalisation of 'Pg' isn't right.
Available drivers: AnyData, CSV, DBM, ExampleP, File, Gofer, LDAP, Log, MVS_FTPSQL, Mock, Ovrimos, PgPP, Proxy, SQLRelay, SQLite2, Sponge, Sprite, Template, TemplateSS, XBase, mysqlPP.
at DBIx/DBStag.pm line 81
...propagated at DBIx/DBStag.pm line 120.
...propagated at t/DBStagTest.pm line 44.
cp DBIx/DBStag/Cookbook.pm blib/lib/DBIx/DBStag/Cookbook.pm
cp DBIx/DBStag.pm blib/lib/DBIx/DBStag.pm
cp DBIx/DBStag/Constraint.pm blib/lib/DBIx/DBStag/Constraint.pm
cp DBIx/DBStag/SQLTemplate.pm blib/lib/DBIx/DBStag/SQLTemplate.pm
cp scripts/selectall_html.pl blib/script/selectall_html.pl
/home/cpanrun/pa-risc1.1/build/5.6.1/bin/perl -I/home/cpanrun/pa-risc1.1/build/5.6.1/lib/5.6.1/PA-RISC1.1-thread-multi -I/home/cpanrun/pa-risc1.1/build/5.6.1/lib/5.6.1 -MExtUtils::MakeMaker -e "MY->fixin(shift)" blib/script/selectall_html.pl
cp scripts/stag-qsh blib/script/stag-qsh
/home/cpanrun/pa-risc1.1/build/5.6.1/bin/perl -I/home/cpanrun/pa-risc1.1/build/5.6.1/lib/5.6.1/PA-RISC1.1-thread-multi -I/home/cpanrun/pa-risc1.1/build/5.6.1/lib/5.6.1 -MExtUtils::MakeMaker -e "MY->fixin(shift)" blib/script/stag-qsh
cp scripts/stag-storenode.pl blib/script/stag-storenode.pl
/home/cpanrun/pa-risc1.1/build/5.6.1/bin/perl -I/home/cpanrun/pa-risc1.1/build/5.6.1/lib/5.6.1/PA-RISC1.1-thread-multi -I/home/cpanrun/pa-risc1.1/build/5.6.1/lib/5.6.1 -MExtUtils::MakeMaker -e "MY->fixin(shift)" blib/script/stag-storenode.pl
cp cgi-bin/ubiq.cgi blib/script/ubiq.cgi
/home/cpanrun/pa-risc1.1/build/5.6.1/bin/perl -I/home/cpanrun/pa-risc1.1/build/5.6.1/lib/5.6.1/PA-RISC1.1-thread-multi -I/home/cpanrun/pa-risc1.1/build/5.6.1/lib/5.6.1 -MExtUtils::MakeMaker -e "MY->fixin(shift)" blib/script/ubiq.cgi
cp scripts/stag-template2bin.pl blib/script/stag-template2bin.pl
/home/cpanrun/pa-risc1.1/build/5.6.1/bin/perl -I/home/cpanrun/pa-risc1.1/build/5.6.1/lib/5.6.1/PA-RISC1.1-thread-multi -I/home/cpanrun/pa-risc1.1/build/5.6.1/lib/5.6.1 -MExtUtils::MakeMaker -e "MY->fixin(shift)" blib/script/stag-template2bin.pl
cp scripts/stag-autotemplate.pl blib/script/stag-autotemplate.pl
/home/cpanrun/pa-risc1.1/build/5.6.1/bin/perl -I/home/cpanrun/pa-risc1.1/build/5.6.1/lib/5.6.1/PA-RISC1.1-thread-multi -I/home/cpanrun/pa-risc1.1/build/5.6.1/lib/5.6.1 -MExtUtils::MakeMaker -e "MY->fixin(shift)" blib/script/stag-autotemplate.pl
cp scripts/stag-ir.pl blib/script/stag-ir.pl
/home/cpanrun/pa-risc1.1/build/5.6.1/bin/perl -I/home/cpanrun/pa-risc1.1/build/5.6.1/lib/5.6.1/PA-RISC1.1-thread-multi -I/home/cpanrun/pa-risc1.1/build/5.6.1/lib/5.6.1 -MExtUtils::MakeMaker -e "MY->fixin(shift)" blib/script/stag-ir.pl
cp scripts/selectall_xml.pl blib/script/selectall_xml.pl
/home/cpanrun/pa-risc1.1/build/5.6.1/bin/perl -I/home/cpanrun/pa-risc1.1/build/5.6.1/lib/5.6.1/PA-RISC1.1-thread-multi -I/home/cpanrun/pa-risc1.1/build/5.6.1/lib/5.6.1 -MExtUtils::MakeMaker -e "MY->fixin(shift)" blib/script/selectall_xml.pl
cp scripts/stag-autoddl.pl blib/script/stag-autoddl.pl
/home/cpanrun/pa-risc1.1/build/5.6.1/bin/perl -I/home/cpanrun/pa-risc1.1/build/5.6.1/lib/5.6.1/PA-RISC1.1-thread-multi -I/home/cpanrun/pa-risc1.1/build/5.6.1/lib/5.6.1 -MExtUtils::MakeMaker -e "MY->fixin(shift)" blib/script/stag-autoddl.pl
Manifying blib/man3/DBIx::DBStag::Cookbook.3
Manifying blib/man1/selectall_html.pl.1
Manifying blib/man3/DBIx::DBStag::Constraint.3
Manifying blib/man1/stag-qsh.1
Manifying blib/man1/stag-storenode.pl.1
Manifying blib/man1/stag-autotemplate.pl.1
Manifying blib/man1/stag-ir.pl.1
Manifying blib/man3/DBIx::DBStag.3
Manifying blib/man3/DBIx::DBStag::SQLTemplate.3
Manifying blib/man1/selectall_xml.pl.1
Manifying blib/man1/stag-autoddl.pl.1
PERL_DL_NONLAZY=1 /home/cpanrun/pa-risc1.1/build/5.6.1/bin/perl -Iblib/arch -Iblib/lib -I/home/cpanrun/pa-risc1.1/build/5.6.1/lib/5.6.1/PA-RISC1.1-thread-multi -I/home/cpanrun/pa-risc1.1/build/5.6.1/lib/5.6.1 -e 'use Test::Harness qw(&runtests $verbose); $verbose=1; runtests @ARGV;' t/*.t
t/autoddl.......1..2
sh: dropdb: not found.
sh: createdb: not found.
PROBLEM recreating using: dropdb test;sleep 2; createdb test
'(game
(version "1")
(seq
(res "xxx")
(seq_dbxref
(dbxref
(db "x")
(acc "1"))))
(annot
(name "cg1")
(fset
(name "cg1-ra")
(fspan
(fstart "1")
(fstop "2")))
(annot_dbxref
(dbxref
(db "x")
(acc "2")))))
Could not connect to database: "dbi:Pg:dbname=test"
EITHER The required DBD driver "Pg" is not installed
OR There is no such database as "dbi:Pg:dbname=test"
COULD NOT CONNECT USING DBI->connect(dbi:Pg:dbname=test )
install_driver(Pg) failed: Can't locate DBD/Pg.pm in @INC (@INC contains: t blib/arch blib/lib /home/cpanrun/pa-risc1.1/build/5.6.1/lib/5.6.1/PA-RISC1.1-thread-multi /home/cpanrun/pa-risc1.1/build/5.6.1/lib/5.6.1 /home/cpanrun/pa-risc1.1/build/5.6.1/lib/site_perl/5.6.1/PA-RISC1.1-thread-multi /home/cpanrun/pa-risc1.1/build/5.6.1/lib/site_perl/5.6.1 /home/cpanrun/pa-risc1.1/build/5.6.1/lib/site_perl .) at (eval 19) line 3.
Perhaps the DBD::Pg perl module hasn't been fully installed,
or perhaps the capitalisation of 'Pg' isn't right.
Available drivers: AnyData, CSV, DBM, ExampleP, File, Gofer, LDAP, Log, MVS_FTPSQL, Mock, Ovrimos, PgPP, Proxy, SQLRelay, SQLite2, Sponge, Sprite, Template, TemplateSS, XBase, mysqlPP.
at blib/lib/DBIx/DBStag.pm line 81
...propagated at blib/lib/DBIx/DBStag.pm line 120.
...propagated at t/DBStagTest.pm line 44.
dubious
Test returned status 127 (wstat 32512, 0x7f00)
DIED. FAILED tests 1-2
Failed 2/2 tests, 0.00% okay
t/bond..........1..5
sh: dropdb: not found.
sh: createdb: not found.
PROBLEM recreating using: dropdb test;sleep 2; createdb test
Could not connect to database: "dbi:Pg:dbname=test"
EITHER The required DBD driver "Pg" is not installed
OR There is no such database as "dbi:Pg:dbname=test"
COULD NOT CONNECT USING DBI->connect(dbi:Pg:dbname=test )
install_driver(Pg) failed: Can't locate DBD/Pg.pm in @INC (@INC contains: t blib/arch blib/lib /home/cpanrun/pa-risc1.1/build/5.6.1/lib/5.6.1/PA-RISC1.1-thread-multi /home/cpanrun/pa-risc1.1/build/5.6.1/lib/5.6.1 /home/cpanrun/pa-risc1.1/build/5.6.1/lib/site_perl/5.6.1/PA-RISC1.1-thread-multi /home/cpanrun/pa-risc1.1/build/5.6.1/lib/site_perl/5.6.1 /home/cpanrun/pa-risc1.1/build/5.6.1/lib/site_perl .) at (eval 19) line 3.
Perhaps the DBD::Pg perl module hasn't been fully installed,
or perhaps the capitalisation of 'Pg' isn't right.
Available drivers: AnyData, CSV, DBM, ExampleP, File, Gofer, LDAP, Log, MVS_FTPSQL, Mock, Ovrimos, PgPP, Proxy, SQLRelay, SQLite2, Sponge, Sprite, Template, TemplateSS, XBase, mysqlPP.
at blib/lib/DBIx/DBStag.pm line 81
...propagated at blib/lib/DBIx/DBStag.pm line 120.
...propagated at t/DBStagTest.pm line 44.
dubious
Test returned status 127 (wstat 32512, 0x7f00)
DIED. FAILED tests 1-5
Failed 5/5 tests, 0.00% okay
t/cvterm........1..9
"my" variable $chado masks earlier declaration in same scope at t/cvterm.t line 83.
sh: dropdb: not found.
sh: createdb: not found.
PROBLEM recreating using: dropdb test;sleep 2; createdb test
Could not connect to database: "dbi:Pg:dbname=test"
EITHER The required DBD driver "Pg" is not installed
OR There is no such database as "dbi:Pg:dbname=test"
COULD NOT CONNECT USING DBI->connect(dbi:Pg:dbname=test )
install_driver(Pg) failed: Can't locate DBD/Pg.pm in @INC (@INC contains: t blib/arch blib/lib /home/cpanrun/pa-risc1.1/build/5.6.1/lib/5.6.1/PA-RISC1.1-thread-multi /home/cpanrun/pa-risc1.1/build/5.6.1/lib/5.6.1 /home/cpanrun/pa-risc1.1/build/5.6.1/lib/site_perl/5.6.1/PA-RISC1.1-thread-multi /home/cpanrun/pa-risc1.1/build/5.6.1/lib/site_perl/5.6.1 /home/cpanrun/pa-risc1.1/build/5.6.1/lib/site_perl .) at (eval 17) line 3.
Perhaps the DBD::Pg perl module hasn't been fully installed,
or perhaps the capitalisation of 'Pg' isn't right.
Available drivers: AnyData, CSV, DBM, ExampleP, File, Gofer, LDAP, Log, MVS_FTPSQL, Mock, Ovrimos, PgPP, Proxy, SQLRelay, SQLite2, Sponge, Sprite, Template, TemplateSS, XBase, mysqlPP.
at blib/lib/DBIx/DBStag.pm line 81
...propagated at blib/lib/DBIx/DBStag.pm line 120.
...propagated at t/DBStagTest.pm line 44.
dubious
Test returned status 127 (wstat 32512, 0x7f00)
DIED. FAILED tests 1-9
Failed 9/9 tests, 0.00% okay
t/feature.......1..5
test feature.t takes a loooooong time, so I'm skipping it.
if you want to run this test, set env DBSTAG_DEVELOPER_MODE
ok 1
ok 2
ok 3
ok 4
ok 5
ok
t/norm2.........1..5
star wars
sci-fi
lucas
george
US
han solo
ford
harrison
princess leia
fisher
carrie
luke skywalker
hamill
mark
darth vader
earl-jones
james
prowse
david
obi-wan kenobi
guiness
alec
attack of the clones
sci-fi
lucas
george
US
obi-wan kenobi
mcgregor
ewan
princess amigdala
portman
natalie
braindead
horror
jackson
peter
new zealand
-
-
-
lord of the rings
fantasy
jackson
peter
new zealand
saruman
lee
christopher
gandalf
kellan
ian
seven samurai
samurai
kurosawa
akira
japan
Kikuchiyo
mifune
toshiro
terminator
sci-fi
cameron
john
US
terminator
schwarzenegger
arnold
terminator2
sci-fi
cameron
john
US
terminator
schwarzenegger
arnold
barton fink
odd
coen
joel
US
coen
ethan
US
barton fink
turturro
john
charlie meadows
goodman
john
ok 1
ok 2
ok 3
'(schema
(cols
(col
(relation "dir")
(name "lname"))
(col
(relation "dir")
(name "fname"))
(col
(relation "dir")
(name "country"))
(col
(relation "movie")
(name "name"))
(col
(relation "movie")
(name "genre"))
(col
(relation "star")
(name "lname"))
(col
(relation "star")
(name "fname"))
(col
(relation "character")
(name "name")))
(constraints
(primarykey
(relation "movie")
(col "name"))
(primarykey
(relation "dir")
(col "lname")
(col "fname")))
(aliases
(alias
(name "dir")
(table "person"))
(alias
(name "movie")
(table "work")))
(top "mset")
(nesting
(movie
(dir "1")
(character
(star "1")))))
'(dirset
(dir
(person
(lname "lucas")
(fname "george")
(country "US")
(movie
(work
(name "star wars")
(genre "sci-fi")
(star
(lname "ford")
(fname "harrison")
(character
(name "han solo")))
(star
(lname "fisher")
(fname "carrie")
(character
(name "princess leia")))
(star
(lname "hamill")
(fname "mark")
(character
(name "luke skywalker")))
(star
(lname "earl-jones")
(fname "james")
(character
(name "darth vader")))
(star
(lname "prowse")
(fname "david")
(character
(name "darth vader")))
(star
(lname "guiness")
(fname "alec")
(character
(name "obi-wan kenobi")))))
(movie
(work
(name "attack of the clones")
(genre "sci-fi")
(star
(lname "mcgregor")
(fname "ewan")
(character
(name "obi-wan kenobi")))
(star
(lname "portman")
(fname "natalie")
(character
(name "princess amigdala")))))))
(dir
(person
(lname "jackson")
(fname "peter")
(country "new zealand")
(movie
(work
(name "braindead")
(genre "horror")
(star
(lname "-")
(fname "-")
(character
(name "-")))))
(movie
(work
(name "lord of the rings")
(genre "fantasy")
(star
(lname "lee")
(fname "christopher")
(character
(name "saruman")))
(star
(lname "kellan")
(fname "ian")
(character
(name "gandalf")))))))
(dir
(person
(lname "kurosawa")
(fname "akira")
(country "japan")
(movie
(work
(name "seven samurai")
(genre "samurai")
(star
(lname "mifune")
(fname "toshiro")
(character
(name "Kikuchiyo")))))))
(dir
(person
(lname "cameron")
(fname "john")
(country "US")
(movie
(work
(name "terminator")
(genre "sci-fi")
(star
(lname "schwarzenegger")
(fname "arnold")
(character
(name "terminator")))))
(movie
(work
(name "terminator2")
(genre "sci-fi")
(star
(lname "schwarzenegger")
(fname "arnold")
(character
(name "terminator")))))))
(dir
(person
(lname "coen")
(fname "joel")
(country "US")
(movie
(work
(name "barton fink")
(genre "odd")
(star
(lname "turturro")
(fname "john")
(character
(name "barton fink")))
(star
(lname "goodman")
(fname "john")
(character
(name "charlie meadows")))))))
(dir
(person
(lname "coen")
(fname "ethan")
(country "US")
(movie
(work
(name "barton fink")
(genre "odd")
(star
(lname "turturro")
(fname "john")
(character
(name "barton fink")))
(star
(lname "goodman")
(fname "john")
(character
(name "charlie meadows"))))))))
ok 4
ok 5
ok
t/norm3.........1..1
'(schema
(cols
(col
(relation "dir")
(name "lname"))
(col
(relation "dir")
(name "fname"))
(col
(relation "dir")
(name "country"))
(col
(relation "movie")
(name "name"))
(col
(relation "movie")
(name "genre"))
(col
(relation "star")
(name "lname"))
(col
(relation "star")
(name "fname"))
(col
(relation "character")
(name "name")))
(aliases
(alias
(name "dir")
(table "person")))
(constraints
(primarykey
(relation "movie")
(col "name"))
(primarykey
(relation "dir")
(col "lname")
(col "fname")))
(top "mset")
(nesting
(movie
(dir "1")
(character
(star "1")))))
'(dirset
(dir
(person
(lname "lucas")
(fname "george")
(country "US")
(movie
(name "star wars")
(genre "sci-fi")
(star
(lname "ford")
(fname "harrison")
(character
(name "han solo")))
(star
(lname "fisher")
(fname "carrie")
(character
(name "princess leia")))
(star
(lname "hamill")
(fname "mark")
(character
(name "luke skywalker")))
(star
(lname "earl-jones")
(fname "james")
(character
(name "darth vader")))
(star
(lname "prowse")
(fname "david")
(character
(name "darth vader")))
(star
(lname "guiness")
(fname "alec")
(character
(name "obi-wan kenobi"))))
(movie
(name "attack of the clones")
(genre "sci-fi")
(star
(lname "mcgregor")
(fname "ewan")
(character
(name "obi-wan kenobi")))
(star
(lname "portman")
(fname "natalie")
(character
(name "princess amigdala"))))))
(dir
(person
(lname "jackson")
(fname "peter")
(country "new zealand")
(movie
(name "braindead")
(genre "horror")
(star
(lname "-")
(fname "-")
(character
(name "-"))))
(movie
(name "lord of the rings")
(genre "fantasy")
(star
(lname "lee")
(fname "christopher")
(character
(name "saruman")))
(star
(lname "kellan")
(fname "ian")
(character
(name "gandalf"))))))
(dir
(person
(lname "kurosawa")
(fname "akira")
(country "japan")
(movie
(name "seven samurai")
(genre "samurai")
(star
(lname "mifune")
(fname "toshiro")
(character
(name "Kikuchiyo"))))))
(dir
(person
(lname "cameron")
(fname "john")
(country "US")
(movie
(name "terminator")
(genre "sci-fi")
(star
(lname "schwarzenegger")
(fname "arnold")
(character
(name "terminator"))))
(movie
(name "terminator2")
(genre "sci-fi")
(star
(lname "schwarzenegger")
(fname "arnold")
(character
(name "terminator"))))))
(dir
(person
(lname "coen")
(fname "joel")
(country "US")
(movie
(name "barton fink")
(genre "odd")
(star
(lname "turturro")
(fname "john")
(character
(name "barton fink")))
(star
(lname "goodman")
(fname "john")
(character
(name "charlie meadows"))))))
(dir
(person
(lname "coen")
(fname "ethan")
(country "US")
(movie
(name "barton fink")
(genre "odd")
(star
(lname "turturro")
(fname "john")
(character
(name "barton fink")))
(star
(lname "goodman")
(fname "john")
(character
(name "charlie meadows")))))))
isa
dog
mammal
isa
cat
mammal
isa
mammal
animal
isa
zebra
horse
isa
horse
mammal
isa
unicorn
horse
isa
unicorn
imaginary-animal
instance-of
rover
dog
instance-of
whiskers
cat
instance-of
spot
dog
parent-of
spot
rover
ok 1
ok
t/normalize.....1..1
star wars
sci-fi
ford
harrison
han solo
fisher
carrie
princess leia
hamill
mark
luke skywalker
earl-jones
james
darth vader
prowse
david
darth vader
guiness
alec
obi-wan kenobi
attack of the clones
sci-fi
mcgregor
ewan
obi-wan kenobi
portman
natalie
princess amigdala
braindead
horror
-
-
-
lord of the rings
fantasy
lee
christopher
saruman
kellan
ian
gandalf
seven samurai
samurai
mifune
toshiro
Kikuchiyo
terminator
sci-fi
schwarzenegger
arnold
terminator
terminator2
sci-fi
schwarzenegger
arnold
terminator
barton fink
odd
turturro
john
barton fink
goodman
john
charlie meadows
star wars
sci-fi
lucas
george
US
han solo
ford
harrison
princess leia
fisher
carrie
luke skywalker
hamill
mark
darth vader
earl-jones
james
prowse
david
obi-wan kenobi
guiness
alec
attack of the clones
sci-fi
lucas
george
US
obi-wan kenobi
mcgregor
ewan
princess amigdala
portman
natalie
braindead
horror
jackson
peter
new zealand
-
-
-
lord of the rings
fantasy
jackson
peter
new zealand
saruman
lee
christopher
gandalf
kellan
ian
seven samurai
samurai
kurosawa
akira
japan
Kikuchiyo
mifune
toshiro
terminator
sci-fi
cameron
john
US
terminator
schwarzenegger
arnold
terminator2
sci-fi
cameron
john
US
terminator
schwarzenegger
arnold
barton fink
odd
coen
joel
US
coen
ethan
US
barton fink
turturro
john
charlie meadows
goodman
john
isa
dog
mammal
isa
cat
mammal
isa
mammal
animal
isa
zebra
horse
isa
horse
mammal
isa
unicorn
horse
isa
unicorn
imaginary-animal
instance-of
rover
dog
instance-of
whiskers
cat
instance-of
spot
dog
parent-of
spot
rover
ok 1
ok
t/parsesql......1..26
'(select
(qual "")
(cols
(col
(func
(name "avg")
(args
(col
(func
(name "abs")
(args
(col
(func
(name "-")
(args
(col
(name "exon.start")
(table "exon"))
(col
(name "exon.end")
(table "exon"))))))))))
(alias "av")))
(from
(leaf
(name "x"))))
ok 1
ok 2
T=x
ok 3
'(select
(qual "")
(cols
(col
(func
(name "avg")
(args
(col
(func
(name "abs")
(args
(col
(name "y")))))))
(alias "av")))
(from
(leaf
(name "x"))))
ok 4
ok 5
T=x
ok 6
'(select
(qual "")
(cols
(col
(name "*")))
(from
(composite
(ctype "NATURAL JOIN")
(first
(leaf
(name "f_type")))
(second
(composite
(ctype "ARRAY\(0x40abfa48\) JOIN")
(first
(leaf
(name "featureloc")))
(second
(composite
(ctype "NATURAL ARRAY\(0x40ac4d90\) JOIN")
(first
(leaf
(name "feature_relationship")
(qual
(type "on")
(expr "bool_expr ARRAY\(0x40ac9a24\)"))
))
(second
(leaf
(name "dbxref"))))))))))
ok 7
ok 8
T=dbxref f_type feature_relationship featureloc
ok 9
'(select
(qual "")
(cols
(col
(name "*")))
(from
(composite
(ctype "ARRAY\(0x40ac49e4\) JOIN")
(first
(leaf
(name "dna")))
(second
(composite
(ctype "NATURAL JOIN")
(first
(leaf
(name "contig")
(qual
(type "using")
(expr "cols ARRAY\(0x40ad2b68\)"))))
(second
(leaf
(name "z"))))))))
ok 10
ok 11
T=contig dna z
ok 12
'(select
(qual "")
(cols
(col
(name "*")))
(from
(composite
(ctype "ARRAY\(0x40abcea0\) JOIN")
(first
(leaf
(name "dna")))
(second
(composite
(ctype "ARRAY\(0x40ad30a8\) JOIN")
(first
(leaf
(name "contig")
(qual
(type "using")
(expr "cols ARRAY\(0x40ad33ac\)"))))
(second
(leaf
(name "clone")
(qual
(type "using")
(expr "cols ARRAY\(0x40ad2f58\)")))))))))
ok 13
ok 14
T=clone contig dna
ok 15
'(select
(qual "")
(cols
(col
(name "*")))
(from
(composite
(ctype "NATURAL JOIN")
(first
(leaf
(name "x")))
(second
(leaf
(name "y"))))))
ok 16
ok 17
x y
ok 18
'(select
(qual "")
(cols
(col
(name "a"))
(col
(name "b")
(alias "y")))
(from
(leaf
(name "x"))))
ok 19
ok 20
'(select
(qual "")
(cols
(col
(func
(name "somefunc")
(args
(col
(name "x.foo")
(table "x")))))
(col
(func
(name "func2")
(args
(col
(name "bar")))))
(col
(func
(name "func3")
(args
(col
(name "y"))))
(alias "r")))
(from
(leaf
(name "x"))))
ok 21
ok 22
ok 23
ok 24
'(select
(qual "")
(cols
(col
(name "transcript.name")
(table "transcript"))
(col
(name "transcript_loc.nbeg")
(table "transcript_loc"))
(col
(name "transcript_loc.nend")
(table "transcript_loc"))
(col
(name "exon.name")
(table "exon"))
(col
(name "exon_loc.nbeg")
(table "exon_loc"))
(col
(name "exon_loc.nend")
(table "exon_loc")))
(from
(composite
(ctype "ARRAY\(0x40ad5718\) JOIN")
(first
(leaf
(name "feature_relationship")))
(second
(composite
(ctype "ARRAY\(0x40ae8a80\) JOIN")
(first
(leaf
(name "f_type")
(alias "transcript")
(qual
(type "on")
(expr "bool_expr ARRAY\(0x40ae644c\)"))))
(second
(composite
(ctype "ARRAY\(0x40ae8d38\) JOIN")
(first
(leaf
(name "featureloc")
(alias "transcript_loc")
(qual
(type "on")
(expr "bool_expr ARRAY\(0x40adfdc4\)"))
))
(second
(composite
(ctype "ARRAY\(0x40aeb314\) JOIN")
(first
(leaf
(name "f_type")
(alias "exon")
(qual
(type "on")
(expr
"bool_expr ARRAY\(0x40ae0aa0\)"))
))
(second
(leaf
(name "featureloc")
(alias "exon_loc")
(qual
(type "on")
(expr
"bool_expr ARRAY\(0x40ae8828\)"))
)))))))))))
ok 25
'(select
(qual "")
(cols
(col
(name "F1.feature_id")
(table "F1"))
(col
(name "F1.dbxrefstr")
(table "F1"))
(col
(name "FL1.nbeg")
(table "FL1"))
(col
(name "FL1.nend")
(table "FL1")))
(from
(composite
(ctype "ARRAY\(0x40ad4fdc\) JOIN")
(first
(leaf
(name "feature")
(alias "F2")))
(second
(composite
(ctype ",")
(first
(leaf
(name "featureloc")
(alias "FL2")
(qual
(type "on")
(expr "bool_expr ARRAY\(0x40ae5f48\)"))))
(second
(composite
(ctype "ARRAY\(0x40ae3e74\) JOIN")
(first
(leaf
(name "feature")
(alias "F1")))
(second
(leaf
(name "featureloc")
(alias "FL1")
(qual
(type "on")
(expr "bool_expr ARRAY\(0x40ae6644\)"))
)))))))))
ok 26
ok
t/store1........1..2
sh: dropdb: not found.
sh: createdb: not found.
PROBLEM recreating using: dropdb test;sleep 2; createdb test
Could not connect to database: "dbi:Pg:dbname=test"
EITHER The required DBD driver "Pg" is not installed
OR There is no such database as "dbi:Pg:dbname=test"
COULD NOT CONNECT USING DBI->connect(dbi:Pg:dbname=test )
install_driver(Pg) failed: Can't locate DBD/Pg.pm in @INC (@INC contains: t blib/arch blib/lib /home/cpanrun/pa-risc1.1/build/5.6.1/lib/5.6.1/PA-RISC1.1-thread-multi /home/cpanrun/pa-risc1.1/build/5.6.1/lib/5.6.1 /home/cpanrun/pa-risc1.1/build/5.6.1/lib/site_perl/5.6.1/PA-RISC1.1-thread-multi /home/cpanrun/pa-risc1.1/build/5.6.1/lib/site_perl/5.6.1 /home/cpanrun/pa-risc1.1/build/5.6.1/lib/site_perl .) at (eval 17) line 3.
Perhaps the DBD::Pg perl module hasn't been fully installed,
or perhaps the capitalisation of 'Pg' isn't right.
Available drivers: AnyData, CSV, DBM, ExampleP, File, Gofer, LDAP, Log, MVS_FTPSQL, Mock, Ovrimos, PgPP, Proxy, SQLRelay, SQLite2, Sponge, Sprite, Template, TemplateSS, XBase, mysqlPP.
at blib/lib/DBIx/DBStag.pm line 81
...propagated at blib/lib/DBIx/DBStag.pm line 120.
...propagated at t/DBStagTest.pm line 44.
dubious
Test returned status 127 (wstat 32512, 0x7f00)
DIED. FAILED tests 1-2
Failed 2/2 tests, 0.00% okay
t/store2........1..2
sh: dropdb: not found.
sh: createdb: not found.
PROBLEM recreating using: dropdb test;sleep 2; createdb test
Could not connect to database: "dbi:Pg:dbname=test"
EITHER The required DBD driver "Pg" is not installed
OR There is no such database as "dbi:Pg:dbname=test"
COULD NOT CONNECT USING DBI->connect(dbi:Pg:dbname=test )
install_driver(Pg) failed: Can't locate DBD/Pg.pm in @INC (@INC contains: t blib/arch blib/lib /home/cpanrun/pa-risc1.1/build/5.6.1/lib/5.6.1/PA-RISC1.1-thread-multi /home/cpanrun/pa-risc1.1/build/5.6.1/lib/5.6.1 /home/cpanrun/pa-risc1.1/build/5.6.1/lib/site_perl/5.6.1/PA-RISC1.1-thread-multi /home/cpanrun/pa-risc1.1/build/5.6.1/lib/site_perl/5.6.1 /home/cpanrun/pa-risc1.1/build/5.6.1/lib/site_perl .) at (eval 17) line 3.
Perhaps the DBD::Pg perl module hasn't been fully installed,
or perhaps the capitalisation of 'Pg' isn't right.
Available drivers: AnyData, CSV, DBM, ExampleP, File, Gofer, LDAP, Log, MVS_FTPSQL, Mock, Ovrimos, PgPP, Proxy, SQLRelay, SQLite2, Sponge, Sprite, Template, TemplateSS, XBase, mysqlPP.
at blib/lib/DBIx/DBStag.pm line 81
...propagated at blib/lib/DBIx/DBStag.pm line 120.
...propagated at t/DBStagTest.pm line 44.
dubious
Test returned status 127 (wstat 32512, 0x7f00)
DIED. FAILED tests 1-2
Failed 2/2 tests, 0.00% okay
t/store2b.......1..2
sh: dropdb: not found.
sh: createdb: not found.
PROBLEM recreating using: dropdb test;sleep 2; createdb test
Could not connect to database: "dbi:Pg:dbname=test"
EITHER The required DBD driver "Pg" is not installed
OR There is no such database as "dbi:Pg:dbname=test"
COULD NOT CONNECT USING DBI->connect(dbi:Pg:dbname=test )
install_driver(Pg) failed: Can't locate DBD/Pg.pm in @INC (@INC contains: t blib/arch blib/lib /home/cpanrun/pa-risc1.1/build/5.6.1/lib/5.6.1/PA-RISC1.1-thread-multi /home/cpanrun/pa-risc1.1/build/5.6.1/lib/5.6.1 /home/cpanrun/pa-risc1.1/build/5.6.1/lib/site_perl/5.6.1/PA-RISC1.1-thread-multi /home/cpanrun/pa-risc1.1/build/5.6.1/lib/site_perl/5.6.1 /home/cpanrun/pa-risc1.1/build/5.6.1/lib/site_perl .) at (eval 17) line 3.
Perhaps the DBD::Pg perl module hasn't been fully installed,
or perhaps the capitalisation of 'Pg' isn't right.
Available drivers: AnyData, CSV, DBM, ExampleP, File, Gofer, LDAP, Log, MVS_FTPSQL, Mock, Ovrimos, PgPP, Proxy, SQLRelay, SQLite2, Sponge, Sprite, Template, TemplateSS, XBase, mysqlPP.
at blib/lib/DBIx/DBStag.pm line 81
...propagated at blib/lib/DBIx/DBStag.pm line 120.
...propagated at t/DBStagTest.pm line 44.
dubious
Test returned status 127 (wstat 32512, 0x7f00)
DIED. FAILED tests 1-2
Failed 2/2 tests, 0.00% okay
t/store3........1..2
sh: dropdb: not found.
sh: createdb: not found.
PROBLEM recreating using: dropdb test;sleep 2; createdb test
Could not connect to database: "dbi:Pg:dbname=test"
EITHER The required DBD driver "Pg" is not installed
OR There is no such database as "dbi:Pg:dbname=test"
COULD NOT CONNECT USING DBI->connect(dbi:Pg:dbname=test )
install_driver(Pg) failed: Can't locate DBD/Pg.pm in @INC (@INC contains: t blib/arch blib/lib /home/cpanrun/pa-risc1.1/build/5.6.1/lib/5.6.1/PA-RISC1.1-thread-multi /home/cpanrun/pa-risc1.1/build/5.6.1/lib/5.6.1 /home/cpanrun/pa-risc1.1/build/5.6.1/lib/site_perl/5.6.1/PA-RISC1.1-thread-multi /home/cpanrun/pa-risc1.1/build/5.6.1/lib/site_perl/5.6.1 /home/cpanrun/pa-risc1.1/build/5.6.1/lib/site_perl .) at (eval 17) line 3.
Perhaps the DBD::Pg perl module hasn't been fully installed,
or perhaps the capitalisation of 'Pg' isn't right.
Available drivers: AnyData, CSV, DBM, ExampleP, File, Gofer, LDAP, Log, MVS_FTPSQL, Mock, Ovrimos, PgPP, Proxy, SQLRelay, SQLite2, Sponge, Sprite, Template, TemplateSS, XBase, mysqlPP.
at blib/lib/DBIx/DBStag.pm line 81
...propagated at blib/lib/DBIx/DBStag.pm line 120.
...propagated at t/DBStagTest.pm line 44.
dubious
Test returned status 127 (wstat 32512, 0x7f00)
DIED. FAILED tests 1-2
Failed 2/2 tests, 0.00% okay
t/store4........1..4
sh: dropdb: not found.
sh: createdb: not found.
PROBLEM recreating using: dropdb test;sleep 2; createdb test
Could not connect to database: "dbi:Pg:dbname=test"
EITHER The required DBD driver "Pg" is not installed
OR There is no such database as "dbi:Pg:dbname=test"
COULD NOT CONNECT USING DBI->connect(dbi:Pg:dbname=test )
install_driver(Pg) failed: Can't locate DBD/Pg.pm in @INC (@INC contains: t blib/arch blib/lib /home/cpanrun/pa-risc1.1/build/5.6.1/lib/5.6.1/PA-RISC1.1-thread-multi /home/cpanrun/pa-risc1.1/build/5.6.1/lib/5.6.1 /home/cpanrun/pa-risc1.1/build/5.6.1/lib/site_perl/5.6.1/PA-RISC1.1-thread-multi /home/cpanrun/pa-risc1.1/build/5.6.1/lib/site_perl/5.6.1 /home/cpanrun/pa-risc1.1/build/5.6.1/lib/site_perl .) at (eval 17) line 3.
Perhaps the DBD::Pg perl module hasn't been fully installed,
or perhaps the capitalisation of 'Pg' isn't right.
Available drivers: AnyData, CSV, DBM, ExampleP, File, Gofer, LDAP, Log, MVS_FTPSQL, Mock, Ovrimos, PgPP, Proxy, SQLRelay, SQLite2, Sponge, Sprite, Template, TemplateSS, XBase, mysqlPP.
at blib/lib/DBIx/DBStag.pm line 81
...propagated at blib/lib/DBIx/DBStag.pm line 120.
...propagated at t/DBStagTest.pm line 44.
dubious
Test returned status 127 (wstat 32512, 0x7f00)
DIED. FAILED tests 1-4
Failed 4/4 tests, 0.00% okay
t/store5........1..4
sh: dropdb: not found.
sh: createdb: not found.
PROBLEM recreating using: dropdb test;sleep 2; createdb test
Could not connect to database: "dbi:Pg:dbname=test"
EITHER The required DBD driver "Pg" is not installed
OR There is no such database as "dbi:Pg:dbname=test"
COULD NOT CONNECT USING DBI->connect(dbi:Pg:dbname=test )
install_driver(Pg) failed: Can't locate DBD/Pg.pm in @INC (@INC contains: t blib/arch blib/lib /home/cpanrun/pa-risc1.1/build/5.6.1/lib/5.6.1/PA-RISC1.1-thread-multi /home/cpanrun/pa-risc1.1/build/5.6.1/lib/5.6.1 /home/cpanrun/pa-risc1.1/build/5.6.1/lib/site_perl/5.6.1/PA-RISC1.1-thread-multi /home/cpanrun/pa-risc1.1/build/5.6.1/lib/site_perl/5.6.1 /home/cpanrun/pa-risc1.1/build/5.6.1/lib/site_perl .) at (eval 17) line 3.
Perhaps the DBD::Pg perl module hasn't been fully installed,
or perhaps the capitalisation of 'Pg' isn't right.
Available drivers: AnyData, CSV, DBM, ExampleP, File, Gofer, LDAP, Log, MVS_FTPSQL, Mock, Ovrimos, PgPP, Proxy, SQLRelay, SQLite2, Sponge, Sprite, Template, TemplateSS, XBase, mysqlPP.
at blib/lib/DBIx/DBStag.pm line 81
...propagated at blib/lib/DBIx/DBStag.pm line 120.
...propagated at t/DBStagTest.pm line 44.
dubious
Test returned status 127 (wstat 32512, 0x7f00)
DIED. FAILED tests 1-4
Failed 4/4 tests, 0.00% okay
t/xort-style....1..3
sh: dropdb: not found.
sh: createdb: not found.
PROBLEM recreating using: dropdb test;sleep 2; createdb test
Could not connect to database: "dbi:Pg:dbname=test"
EITHER The required DBD driver "Pg" is not installed
OR There is no such database as "dbi:Pg:dbname=test"
COULD NOT CONNECT USING DBI->connect(dbi:Pg:dbname=test )
install_driver(Pg) failed: Can't locate DBD/Pg.pm in @INC (@INC contains: t blib/arch blib/lib /home/cpanrun/pa-risc1.1/build/5.6.1/lib/5.6.1/PA-RISC1.1-thread-multi /home/cpanrun/pa-risc1.1/build/5.6.1/lib/5.6.1 /home/cpanrun/pa-risc1.1/build/5.6.1/lib/site_perl/5.6.1/PA-RISC1.1-thread-multi /home/cpanrun/pa-risc1.1/build/5.6.1/lib/site_perl/5.6.1 /home/cpanrun/pa-risc1.1/build/5.6.1/lib/site_perl .) at (eval 17) line 3.
Perhaps the DBD::Pg perl module hasn't been fully installed,
or perhaps the capitalisation of 'Pg' isn't right.
Available drivers: AnyData, CSV, DBM, ExampleP, File, Gofer, LDAP, Log, MVS_FTPSQL, Mock, Ovrimos, PgPP, Proxy, SQLRelay, SQLite2, Sponge, Sprite, Template, TemplateSS, XBase, mysqlPP.
at blib/lib/DBIx/DBStag.pm line 81
...propagated at blib/lib/DBIx/DBStag.pm line 120.
...propagated at t/DBStagTest.pm line 44.
dubious
Test returned status 127 (wstat 32512, 0x7f00)
DIED. FAILED tests 1-3
Failed 3/3 tests, 0.00% okay
Failed 10/15 test scripts, 33.33% okay. 35/73 subtests failed, 52.05% okay.
Failed Test Stat Wstat Total Fail Failed List of Failed
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
t/autoddl.t 127 32512 2 4 200.00% 1-2
t/bond.t 127 32512 5 10 200.00% 1-5
t/cvterm.t 127 32512 9 18 200.00% 1-9
t/store1.t 127 32512 2 4 200.00% 1-2
t/store2.t 127 32512 2 4 200.00% 1-2
t/store2b.t 127 32512 2 4 200.00% 1-2
t/store3.t 127 32512 2 4 200.00% 1-2
t/store4.t 127 32512 4 8 200.00% 1-4
t/store5.t 127 32512 4 8 200.00% 1-4
t/xort-style.t 127 32512 3 6 200.00% 1-3
make: *** [test_dynamic] Error 2