---------------------------------------------- Bio::GMOD File Paths BIN /usr/local/bin NONROOT Checking if your kit is complete... Looks good 'INSTALLSITEMAN1DIR' is not a known MakeMaker parameter name. 'INSTALLSITEMAN3DIR' is not a known MakeMaker parameter name. Writing Makefile for Bio::GMOD b/ExtUtils/MakeMaker.pm line 343. Warning: prerequisite Net::SMTP 2.26 not found at d:/cpanrun/build/5-6-1/lib/ExtUtils/MakeMaker.pm line 343. cp GMOD/Admin/Update/WormBase.pm blib\lib\Bio\GMOD\Admin\Update\WormBase.pm cp GMOD.pm blib\lib\Bio\GMOD.pm cp GMOD/Adaptor/SGD.pm blib\lib\Bio\GMOD\Adaptor\SGD.pm cp GMOD/Admin/Archive.pm blib\lib\Bio\GMOD\Admin\Archive.pm cp GMOD/Adaptor/FlyBase.pm blib\lib\Bio\GMOD\Adaptor\FlyBase.pm cp GMOD/Adaptor/WormBase.pm blib\lib\Bio\GMOD\Adaptor\WormBase.pm cp GMOD/Util/Mirror.pm blib\lib\Bio\GMOD\Util\Mirror.pm cp GMOD/Admin/Monitor/acedb.pm blib\lib\Bio\GMOD\Admin\Monitor\acedb.pm cp GMOD/Admin/Archive/WormBase.pm blib\lib\Bio\GMOD\Admin\Archive\WormBase.pm cp GMOD/Adaptor.pm blib\lib\Bio\GMOD\Adaptor.pm cp GMOD/Util/Status.pm blib\lib\Bio\GMOD\Util\Status.pm cp GMOD/Admin/Monitor/WormBase.pm blib\lib\Bio\GMOD\Admin\Monitor\WormBase.pm cp GMOD/Admin/Monitor/mysqld.pm blib\lib\Bio\GMOD\Admin\Monitor\mysqld.pm cp GMOD/Query/FlyBase.pm blib\lib\Bio\GMOD\Query\FlyBase.pm cp GMOD/Admin/Monitor/blat.pm blib\lib\Bio\GMOD\Admin\Monitor\blat.pm cp GMOD/Admin/Monitor.pm blib\lib\Bio\GMOD\Admin\Monitor.pm cp GMOD/Util/CheckVersions/WormBase.pm blib\lib\Bio\GMOD\Util\CheckVersions\WormBase.pm cp GMOD/Admin/Update.pm blib\lib\Bio\GMOD\Admin\Update.pm cp GMOD/Admin/Monitor/httpd.pm blib\lib\Bio\GMOD\Admin\Monitor\httpd.pm cp GMOD/Util/CheckVersions.pm blib\lib\Bio\GMOD\Util\CheckVersions.pm cp GMOD/Adaptor/generic.pm blib\lib\Bio\GMOD\Adaptor\generic.pm cp GMOD/Util/Rearrange.pm blib\lib\Bio\GMOD\Util\Rearrange.pm cp GMOD/Query/WormBase.pm blib\lib\Bio\GMOD\Query\WormBase.pm cp GMOD/Query.pm blib\lib\Bio\GMOD\Query.pm cp GMOD/StandardURLs.pm blib\lib\Bio\GMOD\StandardURLs.pm D:\cpanrun\build\5-6-1\bin\perl.exe -Iblib\arch -Iblib\lib -Id:\cpanrun\build\5-6-1\lib -Id:\cpanrun\build\5-6-1\lib bin/gmod_standard_urls.PLS bin/gmod_standard_urls.pl Extracting gmod_standard_urls.pl (with variable substitutions) D:\cpanrun\build\5-6-1\bin\perl.exe -Id:\cpanrun\build\5-6-1\lib -Id:\cpanrun\build\5-6-1\lib -MExtUtils::Command -e cp bin/gmod_standard_urls.pl blib\script\gmod_standard_urls.pl D:\cpanrun\build\5-6-1\bin\perl.exe -Id:\cpanrun\build\5-6-1\lib -Id:\cpanrun\build\5-6-1\lib -e "system qq[pl2bat.bat ].shift" blib\script\gmod_standard_urls.pl D:\cpanrun\build\5-6-1\bin\perl.exe -Iblib\arch -Iblib\lib -Id:\cpanrun\build\5-6-1\lib -Id:\cpanrun\build\5-6-1\lib bin/gmod_update_installation-wormbase.PLS bin/gmod_update_installation-wormbase.pl Extracting gmod_update_installation-wormbase.pl (with variable substitutions) D:\cpanrun\build\5-6-1\bin\perl.exe -Id:\cpanrun\build\5-6-1\lib -Id:\cpanrun\build\5-6-1\lib -MExtUtils::Command -e cp bin/gmod_update_installation-wormbase.pl blib\script\gmod_update_installation-wormbase.pl D:\cpanrun\build\5-6-1\bin\perl.exe -Id:\cpanrun\build\5-6-1\lib -Id:\cpanrun\build\5-6-1\lib -e "system qq[pl2bat.bat ].shift" blib\script\gmod_update_installation-wormbase.pl D:\cpanrun\build\5-6-1\bin\perl.exe -Iblib\arch -Iblib\lib -Id:\cpanrun\build\5-6-1\lib -Id:\cpanrun\build\5-6-1\lib bin/gmod_monitor_installation.PLS bin/gmod_monitor_installation.pl Extracting gmod_monitor_installation.pl (with variable substitutions) D:\cpanrun\build\5-6-1\bin\perl.exe -Id:\cpanrun\build\5-6-1\lib -Id:\cpanrun\build\5-6-1\lib -MExtUtils::Command -e cp bin/gmod_monitor_installation.pl blib\script\gmod_monitor_installation.pl D:\cpanrun\build\5-6-1\bin\perl.exe -Id:\cpanrun\build\5-6-1\lib -Id:\cpanrun\build\5-6-1\lib -e "system qq[pl2bat.bat ].shift" blib\script\gmod_monitor_installation.pl D:\cpanrun\build\5-6-1\bin\perl.exe -Iblib\arch -Iblib\lib -Id:\cpanrun\build\5-6-1\lib -Id:\cpanrun\build\5-6-1\lib bin/gmod_update_installation.PLS bin/gmod_update_installation.pl Extracting gmod_update_installation.pl (with variable substitutions) D:\cpanrun\build\5-6-1\bin\perl.exe -Id:\cpanrun\build\5-6-1\lib -Id:\cpanrun\build\5-6-1\lib -MExtUtils::Command -e cp bin/gmod_update_installation.pl blib\script\gmod_update_installation.pl D:\cpanrun\build\5-6-1\bin\perl.exe -Id:\cpanrun\build\5-6-1\lib -Id:\cpanrun\build\5-6-1\lib -e "system qq[pl2bat.bat ].shift" blib\script\gmod_update_installation.pl D:\cpanrun\build\5-6-1\bin\perl.exe -Iblib\arch -Iblib\lib -Id:\cpanrun\build\5-6-1\lib -Id:\cpanrun\build\5-6-1\lib bin/gmod_fetch_genes.PLS bin/gmod_fetch_genes.pl Extracting gmod_fetch_genes.pl (with variable substitutions) D:\cpanrun\build\5-6-1\bin\perl.exe -Id:\cpanrun\build\5-6-1\lib -Id:\cpanrun\build\5-6-1\lib -MExtUtils::Command -e cp bin/gmod_fetch_genes.pl blib\script\gmod_fetch_genes.pl D:\cpanrun\build\5-6-1\bin\perl.exe -Id:\cpanrun\build\5-6-1\lib -Id:\cpanrun\build\5-6-1\lib -e "system qq[pl2bat.bat ].shift" blib\script\gmod_fetch_genes.pl D:\cpanrun\build\5-6-1\bin\perl.exe -Iblib\arch -Iblib\lib -Id:\cpanrun\build\5-6-1\lib -Id:\cpanrun\build\5-6-1\lib bin/gmod_check_versions.PLS bin/gmod_check_versions.pl Extracting gmod_check_versions.pl (with variable substitutions) D:\cpanrun\build\5-6-1\bin\perl.exe -Id:\cpanrun\build\5-6-1\lib -Id:\cpanrun\build\5-6-1\lib -MExtUtils::Command -e cp bin/gmod_check_versions.pl blib\script\gmod_check_versions.pl D:\cpanrun\build\5-6-1\bin\perl.exe -Id:\cpanrun\build\5-6-1\lib -Id:\cpanrun\build\5-6-1\lib -e "system qq[pl2bat.bat ].shift" blib\script\gmod_check_versions.pl D:\cpanrun\build\5-6-1\bin\perl.exe -Iblib\arch -Iblib\lib -Id:\cpanrun\build\5-6-1\lib -Id:\cpanrun\build\5-6-1\lib bin/gmod_monitor_installation-wormbase.PLS bin/gmod_monitor_installation-wormbase.pl Extracting gmod_monitor_installation-wormbase.pl (with variable substitutions) D:\cpanrun\build\5-6-1\bin\perl.exe -Id:\cpanrun\build\5-6-1\lib -Id:\cpanrun\build\5-6-1\lib -MExtUtils::Command -e cp bin/gmod_monitor_installation-wormbase.pl blib\script\gmod_monitor_installation-wormbase.pl D:\cpanrun\build\5-6-1\bin\perl.exe -Id:\cpanrun\build\5-6-1\lib -Id:\cpanrun\build\5-6-1\lib -e "system qq[pl2bat.bat ].shift" blib\script\gmod_monitor_installation-wormbase.pl D:\cpanrun\build\5-6-1\bin\perl.exe -Iblib\arch -Iblib\lib -Id:\cpanrun\build\5-6-1\lib -Id:\cpanrun\build\5-6-1\lib cgi-bin/defaults.wormbase.PLS cgi-bin/defaults.wormbase Extracting defaults.wormbase (with variable substitutions) D:\cpanrun\build\5-6-1\bin\perl.exe -Iblib\arch -Iblib\lib -Id:\cpanrun\build\5-6-1\lib -Id:\cpanrun\build\5-6-1\lib cgi-bin/version.wormbase.PLS cgi-bin/version.wormbase Extracting version.wormbase (with variable substitutions) D:\cpanrun\build\5-6-1\bin\perl.exe -Iblib\arch -Iblib\lib -Id:\cpanrun\build\5-6-1\lib -Id:\cpanrun\build\5-6-1\lib install_util/cgi_install.PLS install_util/cgi_install.pl Extracting cgi_install.pl (with variable substitutions) D:\cpanrun\build\5-6-1\bin\perl.exe -Mblib -Id:\cpanrun\build\5-6-1\lib -Id:\cpanrun\build\5-6-1\lib -e "use Test::Harness qw(&runUsing D:/cpanrun/depot/main/contrib-patched/perl/CPAN/src/Bio-GMOD/blib Can't locate package Bio::GMOD::Util::Email for @Bio::GMOD::Admin::Monitor::ISA at blib/lib/Bio/GMOD/Admin/Monitor/acedb.pm line 7. Can't locate package Bio::GMOD::Util::Email for @Bio::GMOD::Admin::Monitor::ISA at (eval 3ok t\Adapt[The system cannot adubious Test returned status 255 (wstat 65280, 0xff00) DIED. FAILED tests 2-3 Failed 2/3 tests, 33.33% okay t\Archive..................ok t\BioGMOD..................dubious Test returned status 255 (wstat 65280, 0xff00) DIED. FAILED tests 2-13 Failed 12/13 tests, 7.69% okay t\CheckVersions............dubious Test returned status 255 (wstat 65280, 0xff00) DIED. FAILED tests 2-4 Failed 3/4 tests, 25.00% okay t\CheckVersionsWormBase....dubious Test returned status 255 (wstat 65280, 0xff00) DIED. FAILED tests 2-4 Failed 3/4 tests, 25.00% okay t\httpd....................ok t\Mirror...................ok t\mysqld...................ok t\Query....................ok t\QueryWormBase............dubious Test returned status 1 (wstat 256, 0x100) DIED. FAILED test 1 Failed 1/1 tests, 0.00% okay t\Rearrange................ok t\StandardURLs.............dubious Test returned status 255 (wstat 65280, 0xff00) DIED. FAILED tests 2-8 Failed 7/8 tests, 12.50% okay t\Status...................ok t\Update...................dubious Test returned status 255 (wstat 65280, 0xff00) DIED. FAILED tests 2-8 Failed 7/8 tests, 12.50% okay t\UpdateWormBase...........ok Failed Test Stat Wstat Total Fail Failed List of Failed ------------------------------------------------------------------------------- t\Adaptor.t 255 65280 3 4 133.33% 2-3 t\BioGMOD.t 255 65280 13 24 184.62% 2-13 t\CheckVersions.t 255 65280 4 6 150.00% 2-4 t\CheckVersionsWormBase.t 255 65280 4 6 150.00% 2-4 t\QueryWormBase.t 1 256 1 1 100.00% 1 t\StandardURLs.t 255 65280 8 14 175.00% 2-8 t\Update.t 255 65280 8 14 175.00% 2-8 ackage Bio::GMOD::Util::Email for @Bio::GMOD::Admin::Monitor::ISA at blib/lib/Bio/GMOD/Admin/Monitor/httpd.pm line 7. Can't locate package Bio::GMOD::Util::Email for @Bio::GMOD::Admin::Monitor::ISA at (eval 3) line 2. [The system cannot accept the date entered. Enter the new date: (mm-dd-yy) ] Downloading file README... Can't locate package Bio::GMOD::Util::Email for @Bio::GMOD::Admin::Monitor::ISA at blib/lib/Bio/GMOD/Admin/Monitor/mysqld.pm line 6. Can't locate package Bio::GMOD::Util::Email for @Bio::GMOD::Admin::Monitor::ISA at (eval 3) line 2. Useless use of string in void context at blib/lib/Bio/GMOD/Query.pm line 29. # Failed test (t\QueryWormBase.t at line 33) # Tried to use 'Bio::GMOD::Query::WormBase'. # Error: Can't locate Ace.pm in @INC (@INC contains: t .. . ./blib/lib D:/cpanrun/depot/main/contrib-patched/perl/CPAN/src/Bio-GMOD/blib/arch D:/cpanrun/depot/main/contrib-patched/perl/CPAN/src/Bio-GMOD/blib/lib d:\cpanrun\build\5-6-1\lib D:\cpanrun\depot\main\Apps\CPAN_Run\lib D:/cpanrun/build/5-6-1/lib D:/cpanrun/build/5-6-1/site/lib) at blib/lib/Bio/GMOD/Query/WormBase.pm line 5. # BEGIN failed--compilation aborted at t\QueryWormBase.t line 33. # Compilation failed in require at (eval 3) line 2. # BEGIN failed--compilation aborted at (eval 3) line 2. # Looks like you failed 1 test of 1. [The system cannot accept the date entered. Enter the new date: (mm-dd-yy) ] Could not subclass Bio::GMOD::Adaptor::WormBase: ... The getpwnam function is unimplemented at blib/lib/Bio/GMOD/Adaptor/WormBase.pm line 15. Compilation failed in require at (eval 6) line 3. ...propagated at blib/lib/Bio/GMOD/Util/Status.pm line 36. # Looks like you planned 8 tests but only ran 1. # Looks like your test died just after 1. [The system cannot accept the date entered. Enter the new date: (mm-dd-yy) ] Could not subclass Bio::GMOD::Adaptor::WormBase: ... The getpwnam function is unimplemented at blib/lib/Bio/GMOD/Adaptor/WormBase.pm line 15. Compilation failed in require at (eval 11) line 3. ...propagated at blib/lib/Bio/GMOD/Util/Status.pm line 36. # Looks like you planned 8 tests but only ran 1. # Looks like your test died just after 1. Failed 7/16 test scripts, 56.25% okay. 35/60 subtests failed, 41.67% okay. NMAKE : fatal error U1077: 'D:\cpanrun\build\5-6-1\bin\perl.exe' : return code '0xff' Stop.