Checking if your kit is complete... Looks good Writing Makefile for Bio::NEXUS cp lib/Bio/NEXUS/DataBlock.pm blib/lib/Bio/NEXUS/DataBlock.pm cp lib/Bio/NEXUS/CodonsBlock.pm blib/lib/Bio/NEXUS/CodonsBlock.pm cp lib/Bio/NEXUS/NotesBlock.pm blib/lib/Bio/NEXUS/NotesBlock.pm cp lib/Bio/NEXUS/HistoryBlock.pm blib/lib/Bio/NEXUS/HistoryBlock.pm cp lib/Bio/NEXUS/TaxUnit.pm blib/lib/Bio/NEXUS/TaxUnit.pm cp lib/Bio/NEXUS/CharactersBlock.pm blib/lib/Bio/NEXUS/CharactersBlock.pm cp lib/Bio/NEXUS/SpanBlock.pm blib/lib/Bio/NEXUS/SpanBlock.pm cp lib/Bio/NEXUS/UnalignedBlock.pm blib/lib/Bio/NEXUS/UnalignedBlock.pm cp lib/Bio/NEXUS/TaxUnitSet.pm blib/lib/Bio/NEXUS/TaxUnitSet.pm cp lib/Bio/NEXUS/DistancesBlock.pm blib/lib/Bio/NEXUS/DistancesBlock.pm cp lib/Bio/NEXUS/MatrixBlock.pm blib/lib/Bio/NEXUS/MatrixBlock.pm cp lib/Bio/NEXUS/UnknownBlock.pm blib/lib/Bio/NEXUS/UnknownBlock.pm cp lib/Bio/NEXUS/Node.pm blib/lib/Bio/NEXUS/Node.pm cp lib/Bio/NEXUS/Tree.pm blib/lib/Bio/NEXUS/Tree.pm cp lib/Bio/NEXUS/WeightSet.pm blib/lib/Bio/NEXUS/WeightSet.pm cp lib/Bio/NEXUS/TaxaBlock.pm blib/lib/Bio/NEXUS/TaxaBlock.pm cp lib/Bio/NEXUS/TreesBlock.pm blib/lib/Bio/NEXUS/TreesBlock.pm cp lib/Bio/NEXUS/SetsBlock.pm blib/lib/Bio/NEXUS/SetsBlock.pm cp lib/Bio/NEXUS/AssumptionsBlock.pm blib/lib/Bio/NEXUS/AssumptionsBlock.pm cp lib/Bio/NEXUS/Block.pm blib/lib/Bio/NEXUS/Block.pm cp lib/Bio/NEXUS.pm blib/lib/Bio/NEXUS.pm cp lib/Bio/NEXUS/Functions.pm blib/lib/Bio/NEXUS/Functions.pm cp exec/nextool.pl blib/script/nextool.pl /Users/cpanrun/pristine/5.8.7/bin/perl "-MExtUtils::MY" -e "MY->fixin(shift)" blib/script/nextool.pl cp exec/nex2text_tree.pl blib/script/nex2text_tree.pl /Users/cpanrun/pristine/5.8.7/bin/perl "-MExtUtils::MY" -e "MY->fixin(shift)" blib/script/nex2text_tree.pl cp exec/nexplot.pl blib/script/nexplot.pl /Users/cpanrun/pristine/5.8.7/bin/perl "-MExtUtils::MY" -e "MY->fixin(shift)" blib/script/nexplot.pl Manifying blib/man1/nextool.pl.1 Manifying blib/man1/nex2text_tree.pl.1 Manifying blib/man1/nexplot.pl.1 Manifying blib/man3/Bio::NEXUS::DataBlock.3 Manifying blib/man3/Bio::NEXUS::CodonsBlock.3 Manifying blib/man3/Bio::NEXUS::NotesBlock.3 Manifying blib/man3/Bio::NEXUS::HistoryBlock.3 Manifying blib/man3/Bio::NEXUS::TaxUnit.3 Manifying blib/man3/Bio::NEXUS::CharactersBlock.3 Manifying blib/man3/Bio::NEXUS::SpanBlock.3 Manifying blib/man3/Bio::NEXUS::UnalignedBlock.3 Manifying blib/man3/Bio::NEXUS::TaxUnitSet.3 Manifying blib/man3/Bio::NEXUS::DistancesBlock.3 Manifying blib/man3/Bio::NEXUS::MatrixBlock.3 Manifying blib/man3/Bio::NEXUS::UnknownBlock.3 Manifying blib/man3/Bio::NEXUS::Node.3 Manifying blib/man3/Bio::NEXUS::Tree.3 Manifying blib/man3/Bio::NEXUS::WeightSet.3 Manifying blib/man3/Bio::NEXUS::SetsBlock.3 Manifying blib/man3/Bio::NEXUS::TaxaBlock.3 Manifying blib/man3/Bio::NEXUS::TreesBlock.3 Manifying blib/man3/Bio::NEXUS::AssumptionsBlock.3 Manifying blib/man3/Bio::NEXUS::Block.3 Manifying blib/man3/Bio::NEXUS::Functions.3 Manifying blib/man3/Bio::NEXUS.3 PERL_DL_NONLAZY=1 /Users/cpanrun/pristine/5.8.7/bin/perl "-MExtUtils::Command::MM" "-e" "test_harness(0, 'blib/lib', 'blib/arch')" t/*.t t/01_nexus.................ok t/02_wrong_format..........Use of uninitialized value in concatenation (.) or string at /Users/cpanrun/depot/main/contrib-patched/perl/CPAN/src/Bio-NEXUS/blib/lib/Bio/NEXUS.pm line 212. ok t/03_trees.................ok t/04_labels................ok t/05_radical_whitespace....ok t/06_tree_parse............ok t/07_quoted_labels.........ok t/09_todo..................ok t/10_perlpod...............ok t/11_podcoverage...........ok All tests successful. Files=10, Tests=164, 4 wallclock secs ( 2.51 cusr + 0.56 csys = 3.07 CPU) Installing /Users/cpanrun/pristine/5.8.7/lib/site_perl/5.8.7/Bio/NEXUS.pm Installing /Users/cpanrun/pristine/5.8.7/lib/site_perl/5.8.7/Bio/NEXUS/AssumptionsBlock.pm Installing /Users/cpanrun/pristine/5.8.7/lib/site_perl/5.8.7/Bio/NEXUS/Block.pm Installing /Users/cpanrun/pristine/5.8.7/lib/site_perl/5.8.7/Bio/NEXUS/CharactersBlock.pm Installing /Users/cpanrun/pristine/5.8.7/lib/site_perl/5.8.7/Bio/NEXUS/CodonsBlock.pm Installing /Users/cpanrun/pristine/5.8.7/lib/site_perl/5.8.7/Bio/NEXUS/DataBlock.pm Installing /Users/cpanrun/pristine/5.8.7/lib/site_perl/5.8.7/Bio/NEXUS/DistancesBlock.pm Installing /Users/cpanrun/pristine/5.8.7/lib/site_perl/5.8.7/Bio/NEXUS/Functions.pm Installing /Users/cpanrun/pristine/5.8.7/lib/site_perl/5.8.7/Bio/NEXUS/HistoryBlock.pm Installing /Users/cpanrun/pristine/5.8.7/lib/site_perl/5.8.7/Bio/NEXUS/MatrixBlock.pm Installing /Users/cpanrun/pristine/5.8.7/lib/site_perl/5.8.7/Bio/NEXUS/Node.pm Installing /Users/cpanrun/pristine/5.8.7/lib/site_perl/5.8.7/Bio/NEXUS/NotesBlock.pm Installing /Users/cpanrun/pristine/5.8.7/lib/site_perl/5.8.7/Bio/NEXUS/SetsBlock.pm Installing /Users/cpanrun/pristine/5.8.7/lib/site_perl/5.8.7/Bio/NEXUS/SpanBlock.pm Installing /Users/cpanrun/pristine/5.8.7/lib/site_perl/5.8.7/Bio/NEXUS/TaxaBlock.pm Installing /Users/cpanrun/pristine/5.8.7/lib/site_perl/5.8.7/Bio/NEXUS/TaxUnit.pm Installing /Users/cpanrun/pristine/5.8.7/lib/site_perl/5.8.7/Bio/NEXUS/TaxUnitSet.pm Installing /Users/cpanrun/pristine/5.8.7/lib/site_perl/5.8.7/Bio/NEXUS/Tree.pm Installing /Users/cpanrun/pristine/5.8.7/lib/site_perl/5.8.7/Bio/NEXUS/TreesBlock.pm Installing /Users/cpanrun/pristine/5.8.7/lib/site_perl/5.8.7/Bio/NEXUS/UnalignedBlock.pm Installing /Users/cpanrun/pristine/5.8.7/lib/site_perl/5.8.7/Bio/NEXUS/UnknownBlock.pm Installing /Users/cpanrun/pristine/5.8.7/lib/site_perl/5.8.7/Bio/NEXUS/WeightSet.pm Installing /Users/cpanrun/pristine/5.8.7/man/man1/nex2text_tree.pl.1 Installing /Users/cpanrun/pristine/5.8.7/man/man1/nexplot.pl.1 Installing /Users/cpanrun/pristine/5.8.7/man/man1/nextool.pl.1 Installing /Users/cpanrun/pristine/5.8.7/man/man3/Bio::NEXUS.3 Installing /Users/cpanrun/pristine/5.8.7/man/man3/Bio::NEXUS::AssumptionsBlock.3 Installing /Users/cpanrun/pristine/5.8.7/man/man3/Bio::NEXUS::Block.3 Installing /Users/cpanrun/pristine/5.8.7/man/man3/Bio::NEXUS::CharactersBlock.3 Installing /Users/cpanrun/pristine/5.8.7/man/man3/Bio::NEXUS::CodonsBlock.3 Installing /Users/cpanrun/pristine/5.8.7/man/man3/Bio::NEXUS::DataBlock.3 Installing /Users/cpanrun/pristine/5.8.7/man/man3/Bio::NEXUS::DistancesBlock.3 Installing /Users/cpanrun/pristine/5.8.7/man/man3/Bio::NEXUS::Functions.3 Installing /Users/cpanrun/pristine/5.8.7/man/man3/Bio::NEXUS::HistoryBlock.3 Installing /Users/cpanrun/pristine/5.8.7/man/man3/Bio::NEXUS::MatrixBlock.3 Installing /Users/cpanrun/pristine/5.8.7/man/man3/Bio::NEXUS::Node.3 Installing /Users/cpanrun/pristine/5.8.7/man/man3/Bio::NEXUS::NotesBlock.3 Installing /Users/cpanrun/pristine/5.8.7/man/man3/Bio::NEXUS::SetsBlock.3 Installing /Users/cpanrun/pristine/5.8.7/man/man3/Bio::NEXUS::SpanBlock.3 Installing /Users/cpanrun/pristine/5.8.7/man/man3/Bio::NEXUS::TaxaBlock.3 Installing /Users/cpanrun/pristine/5.8.7/man/man3/Bio::NEXUS::TaxUnit.3 Installing /Users/cpanrun/pristine/5.8.7/man/man3/Bio::NEXUS::TaxUnitSet.3 Installing /Users/cpanrun/pristine/5.8.7/man/man3/Bio::NEXUS::Tree.3 Installing /Users/cpanrun/pristine/5.8.7/man/man3/Bio::NEXUS::TreesBlock.3 Installing /Users/cpanrun/pristine/5.8.7/man/man3/Bio::NEXUS::UnalignedBlock.3 Installing /Users/cpanrun/pristine/5.8.7/man/man3/Bio::NEXUS::UnknownBlock.3 Installing /Users/cpanrun/pristine/5.8.7/man/man3/Bio::NEXUS::WeightSet.3 Installing /Users/cpanrun/pristine/5.8.7/bin/nextool.pl Appending installation info to /Users/cpanrun/pristine/5.8.7/lib/5.8.7/darwin-thread-multi-2level/perllocal.pod /bin/sh -c true