Generated sub tests. go make show_tests to see available subtests Checking if your kit is complete... Looks good Writing Makefile for Bio cp Bio/Expression/MicroarrayI.pm blib/lib/Bio/Expression/MicroarrayI.pm cp Bio/Expression/Microarray/Affymetrix/Mas50Data.pm blib/lib/Bio/Expression/Microarray/Affymetrix/Mas50Data.pm cp Bio/Expression/MicroarrayIO/dchipxls.pm blib/lib/Bio/Expression/MicroarrayIO/dchipxls.pm cp Bio/Expression/Microarray/Affymetrix/dChipXLS.pm blib/lib/Bio/Expression/Microarray/Affymetrix/dChipXLS.pm cp Bio/Expression/MicroarrayIO/mas50txt.pm blib/lib/Bio/Expression/MicroarrayIO/mas50txt.pm cp Bio/Expression/Microarray/Affymetrix/dChipArray.pm blib/lib/Bio/Expression/Microarray/Affymetrix/dChipArray.pm cp Bio/Expression/Microarray/Affymetrix/CelArray.pm blib/lib/Bio/Expression/Microarray/Affymetrix/CelArray.pm cp Bio/Expression/MicroarrayIO/affymetrix.pm blib/lib/Bio/Expression/MicroarrayIO/affymetrix.pm cp Bio/Expression/Microarray/Affymetrix/Array.pm blib/lib/Bio/Expression/Microarray/Affymetrix/Array.pm cp Bio/Expression/Microarray/FeatureI.pm blib/lib/Bio/Expression/Microarray/FeatureI.pm cp Bio/Expression/Microarray/Affymetrix/Data.pm blib/lib/Bio/Expression/Microarray/Affymetrix/Data.pm cp Bio/Expression/Microarray/DataI.pm blib/lib/Bio/Expression/Microarray/DataI.pm cp Bio/Expression/Microarray/Affymetrix/Feature.pm blib/lib/Bio/Expression/Microarray/Affymetrix/Feature.pm cp Bio/Expression/Microarray/Affymetrix/Changes.txt blib/lib/Bio/Expression/Microarray/Affymetrix/Changes.txt cp Bio/Expression/Microarray/ArrayI.pm blib/lib/Bio/Expression/Microarray/ArrayI.pm cp Bio/Expression/Microarray/Affymetrix/ArrayDesign.pm blib/lib/Bio/Expression/Microarray/Affymetrix/ArrayDesign.pm cp Bio/Expression/MicroarrayIO.pm blib/lib/Bio/Expression/MicroarrayIO.pm cp Bio/Expression/Microarray/Affymetrix/Mas50TxtArray.pm blib/lib/Bio/Expression/Microarray/Affymetrix/Mas50TxtArray.pm Manifying blib/man3/Bio::Expression::MicroarrayIO::dchipxls.3 Manifying blib/man3/Bio::Expression::Microarray::Affymetrix::dChipXLS.3 Manifying blib/man3/Bio::Expression::Microarray::Affymetrix::Feature.3 Manifying blib/man3/Bio::Expression::MicroarrayIO::mas50txt.3 Manifying blib/man3/Bio::Expression::Microarray::Affymetrix::dChipArray.3 Manifying blib/man3/Bio::Expression::MicroarrayIO::affymetrix.3 Manifying blib/man3/Bio::Expression::Microarray::Affymetrix::Array.3 Manifying blib/man3/Bio::Expression::Microarray::Affymetrix::CelArray.3 Manifying blib/man3/Bio::Expression::Microarray::Affymetrix::ArrayDesign.3 Manifying blib/man3/Bio::Expression::Microarray::FeatureI.3 Manifying blib/man3/Bio::Expression::MicroarrayIO.3 Manifying blib/man3/Bio::Expression::Microarray::Affymetrix::Mas50TxtArray.3 Manifying blib/man3/Bio::Expression::Microarray::Affymetrix::Data.3 PERL_DL_NONLAZY=1 /Users/cpanrun/pristine/5.8.7/bin/perl "-MExtUtils::Command::MM" "-e" "test_harness(0, 'blib/lib', 'blib/arch')" t/*.t t/affy_u133a_cel.......Can't locate Bio/Root/Root.pm in @INC (@INC contains: t . /Users/cpanrun/depot/main/contrib-patched/perl/CPAN/src/bioperl-microarray/blib/lib /Users/cpanrun/depot/main/contrib-patched/perl/CPAN/src/bioperl-microarray/blib/arch /Users/cpanrun/depot/main/Apps/CPAN_Run/lib /Users/cpanrun/pristine/5.8.7/lib/5.8.7/darwin-thread-multi-2level /Users/cpanrun/pristine/5.8.7/lib/5.8.7 /Users/cpanrun/pristine/5.8.7/lib/site_perl/5.8.7/darwin-thread-multi-2level /Users/cpanrun/pristine/5.8.7/lib/site_perl/5.8.7 /Users/cpanrun/pristine/5.8.7/lib/site_perl) at Bio/Expression/Microarray/Affymetrix/Array.pm line 56. BEGIN failed--compilation aborted at Bio/Expression/Microarray/Affymetrix/Array.pm line 56. Compilation failed in require at t/affy_u133a_cel.t line 32. BEGIN failed--compilation aborted at t/affy_u133a_cel.t line 32. dubious Test returned status 2 (wstat 512, 0x200) DIED. FAILED tests 1-39 Failed 39/39 tests, 0.00% okay t/affy_u133a_stream....Can't locate Bio/Root/Root.pm in @INC (@INC contains: t . /Users/cpanrun/depot/main/contrib-patched/perl/CPAN/src/bioperl-microarray/blib/lib /Users/cpanrun/depot/main/contrib-patched/perl/CPAN/src/bioperl-microarray/blib/arch /Users/cpanrun/depot/main/Apps/CPAN_Run/lib /Users/cpanrun/pristine/5.8.7/lib/5.8.7/darwin-thread-multi-2level /Users/cpanrun/pristine/5.8.7/lib/5.8.7 /Users/cpanrun/pristine/5.8.7/lib/site_perl/5.8.7/darwin-thread-multi-2level /Users/cpanrun/pristine/5.8.7/lib/site_perl/5.8.7 /Users/cpanrun/pristine/5.8.7/lib/site_perl) at Bio/Expression/Microarray/Affymetrix/Array.pm line 56. BEGIN failed--compilation aborted at Bio/Expression/Microarray/Affymetrix/Array.pm line 56. Compilation failed in require at t/affy_u133a_stream.t line 32. BEGIN failed--compilation aborted at t/affy_u133a_stream.t line 32. dubious Test returned status 2 (wstat 512, 0x200) DIED. FAILED tests 1-9 Failed 9/9 tests, 0.00% okay t/affy_u133a_txt.......Can't locate Bio/Root/Root.pm in @INC (@INC contains: t . /Users/cpanrun/depot/main/contrib-patched/perl/CPAN/src/bioperl-microarray/blib/lib /Users/cpanrun/depot/main/contrib-patched/perl/CPAN/src/bioperl-microarray/blib/arch /Users/cpanrun/depot/main/Apps/CPAN_Run/lib /Users/cpanrun/pristine/5.8.7/lib/5.8.7/darwin-thread-multi-2level /Users/cpanrun/pristine/5.8.7/lib/5.8.7 /Users/cpanrun/pristine/5.8.7/lib/site_perl/5.8.7/darwin-thread-multi-2level /Users/cpanrun/pristine/5.8.7/lib/site_perl/5.8.7 /Users/cpanrun/pristine/5.8.7/lib/site_perl) at Bio/Expression/Microarray/Affymetrix/Array.pm line 56. BEGIN failed--compilation aborted at Bio/Expression/Microarray/Affymetrix/Array.pm line 56. Compilation failed in require at t/affy_u133a_txt.t line 32. BEGIN failed--compilation aborted at t/affy_u133a_txt.t line 32. dubious Test returned status 2 (wstat 512, 0x200) DIED. FAILED tests 1-18 Failed 18/18 tests, 0.00% okay Failed Test Stat Wstat Total Fail Failed List of Failed ------------------------------------------------------------------------------- t/affy_u133a_cel.t 2 512 39 78 200.00% 1-39 t/affy_u133a_stream.t 2 512 9 18 200.00% 1-9 t/affy_u133a_txt.t 2 512 18 36 200.00% 1-18 Failed 3/3 test scripts, 0.00% okay. 66/66 subtests failed, 0.00% okay. make: *** [test_dynamic] Error 2