Checking if your kit is complete... Looks good Writing Makefile for Bio::PrimerDesigner cp lib/Bio/PrimerDesigner/primer3.pm blib/lib/Bio/PrimerDesigner/primer3.pm cp lib/Bio/PrimerDesigner.pm blib/lib/Bio/PrimerDesigner.pm cp lib/Bio/PrimerDesigner/Remote.pm blib/lib/Bio/PrimerDesigner/Remote.pm cp lib/Bio/PrimerDesigner/Tables.pm blib/lib/Bio/PrimerDesigner/Tables.pm cp lib/Bio/PrimerDesigner/epcr.pm blib/lib/Bio/PrimerDesigner/epcr.pm cp lib/Bio/PrimerDesigner/Result.pm blib/lib/Bio/PrimerDesigner/Result.pm cp bin/primer_designer.pl blib/script/primer_designer.pl /home/cpanrun/pa-risc1.1/build/5.8.2/bin/perl "-MExtUtils::MY" -e "MY->fixin(shift)" blib/script/primer_designer.pl Manifying blib/man1/primer_designer.pl.1 Manifying blib/man3/Bio::PrimerDesigner::primer3.3 Manifying blib/man3/Bio::PrimerDesigner::Tables.3 Manifying blib/man3/Bio::PrimerDesigner::Remote.3 Manifying blib/man3/Bio::PrimerDesigner.3 Manifying blib/man3/Bio::PrimerDesigner::epcr.3 Manifying blib/man3/Bio::PrimerDesigner::Result.3 PERL_DL_NONLAZY=1 /home/cpanrun/pa-risc1.1/build/5.8.2/bin/perl "-MExtUtils::Command::MM" "-e" "test_harness(1, 'blib/lib', 'blib/arch')" t/*.t t/epcr...............1..8 ok 1 - use Bio::PrimerDesigner; ok 2 - The object isa Bio::PrimerDesigner ok 3 - program isa Bio::PrimerDesigner::epcr ok 4 - binary_name is "e-PCR" Use of uninitialized value in string eq at /home/cpanrun/depot/main/contrib-patched/perl/CPAN/src/Bio-PrimerDesigner/blib/lib/Bio/PrimerDesigner/epcr.pm line 110. ok 5 - program returns params ok 6 - program returns no aliases Can't exec "/e-PCR": No such file or directory at /home/cpanrun/depot/main/contrib-patched/perl/CPAN/src/Bio-PrimerDesigner/blib/lib/Bio/PrimerDesigner/epcr.pm line 177. readline() on closed filehandle EPCR at /home/cpanrun/depot/main/contrib-patched/perl/CPAN/src/Bio-PrimerDesigner/blib/lib/Bio/PrimerDesigner/epcr.pm line 178. ok 7 - e-PCR verification fails with no args ok 8 - run method fails with no arguments ok t/primer3............1..7 ok 1 - use Bio::PrimerDesigner; ok 2 - The object isa Bio::PrimerDesigner ok 3 - program isa Bio::PrimerDesigner::primer3 ok 4 - binary_name is "primer3" ok 5 - program returns params ok 6 - program returns aliases ok 7 - design method fails without arguments ok t/primer_designer....1..25 ok 1 - use Bio::PrimerDesigner; ok 2 - The object isa Bio::PrimerDesigner ok 3 - Default method is "local" ok 4 - Default url is "aceserver.biotech.ubc.ca/cgi-bin/primer_designer.cgi" ok 5 - Default binary path is "/usr/local/bin" ok 6 - The object isa Bio::PrimerDesigner::primer3 ok 7 - object with args isa Bio::PrimerDesigner ok 8 - method is "remote" ok 9 - url is "https://www.google.com/" ok 10 - binary_path is "/bin" ok 11 - The object isa Bio::PrimerDesigner::epcr ok 12 - method set to "remote" ok 13 - method rejects bad arg ok 14 - Error message set ok 15 - method remembers last good arg ok 16 - url set to "http://www.google.com" ok 17 - url takes empty arg, resets to default ok 18 - binary_path set to "/bin" ok 19 - binary_path rejects bad arg ok 20 - Error message set ok 21 - binary_path remembers last good arg ok 22 - program isa Bio::PrimerDesigner::epcr ok 23 - program rejects bad arg ok 24 - Error message set ok 25 - program still isa Bio::PrimerDesigner::epcr ok t/remote.............1..5 ok 1 - use Bio::PrimerDesigner::Remote; ok 2 - The object isa Bio::PrimerDesigner::Remote ok 3 - Remote croaks with no args ok 4 - Error because no URL # Failed test (t/remote.t at line 20) # Looks like you failed 1 tests of 5. not ok 5 - Call to remote server dubious Test returned status 1 (wstat 256, 0x100) DIED. FAILED test 5 Failed 1/5 tests, 80.00% okay t/result.............1..3 ok 1 - use Bio::PrimerDesigner; Use of uninitialized value in join or string at /home/cpanrun/depot/main/contrib-patched/perl/CPAN/src/Bio-PrimerDesigner/blib/lib/Bio/PrimerDesigner/primer3.pm line 275. ok 2 # skip Can't get remote server call to work ok 3 # skip Can't get remote server call to work ok 2/3 skipped: Can't get remote server call to work t/tables.............1..10 ok 1 - use Bio::PrimerDesigner::Tables; ok 2 - The object isa Bio::PrimerDesigner::Tables Use of uninitialized value in join or string at /home/cpanrun/depot/main/contrib-patched/perl/CPAN/src/Bio-PrimerDesigner/blib/lib/Bio/PrimerDesigner/primer3.pm line 275. ok 3 # skip Can't get remote server call to work ok 4 # skip Can't get remote server call to work ok 5 # skip Can't get remote server call to work ok 6 # skip Can't get remote server call to work ok 7 # skip Can't get remote server call to work ok 8 # skip Can't get remote server call to work ok 9 # skip Can't get remote server call to work ok 10 # skip Can't get remote server call to work ok 8/10 skipped: Can't get remote server call to work Failed 1/6 test scripts, 83.33% okay. 1/58 subtests failed, 98.28% okay. Failed Test Stat Wstat Total Fail Failed List of Failed --------------------------------------------------------------------------------------------------------------------------- t/remote.t 1 256 5 1 20.00% 5 10 subtests skipped. make: *** [test_dynamic] Error 25