Checking if your kit is complete... Warning: the following files are missing in your kit: Makefile lib/Bio/Das/ProServer/SourceAdaptor/Transport/.#dbi.pm.2.55 Please inform the author. Writing Makefile for Bio::Das::ProServer cp lib/Bio/Das/ProServer/SourceAdaptor/decipher.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/decipher.pm cp lib/Bio/Das/ProServer/SourceAdaptor/cosmic.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/cosmic.pm cp lib/Bio/Das/ProServer/SourceAdaptor/jgi_dbi.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/jgi_dbi.pm cp lib/Bio/Das/ProServer/SourceAdaptor/cosmic_genomic.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/cosmic_genomic.pm cp lib/Bio/Das/ProServer/SourceAdaptor/indel_Zv4.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/indel_Zv4.pm cp lib/Bio/Das/ProServer/SourceAdaptor/bioseq.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/bioseq.pm cp lib/Bio/Das/ProServer/SourceAdaptor/indel_Zv5.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/indel_Zv5.pm cp lib/Bio/Das/ProServer/SourceAdaptor/cache.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/cache.pm cp lib/Bio/Das/ProServer/SourceHydra/dbi.pm blib/lib/Bio/Das/ProServer/SourceHydra/dbi.pm cp lib/Bio/Das/ProServer/SourceAdaptor/grouped_db.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/grouped_db.pm cp lib/Bio/Das/ProServer/SourceAdaptor/mirna.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/mirna.pm cp lib/Bio/Das/ProServer/SourceAdaptor/simplescore_db.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/simplescore_db.pm cp lib/Bio/Das/ProServer.pm blib/lib/Bio/Das/ProServer.pm cp lib/Bio/Das/ProServer/SourceAdaptor/chori_243.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/chori_243.pm cp lib/Bio/Das/ProServer/Config.pm blib/lib/Bio/Das/ProServer/Config.pm cp lib/Bio/Das/ProServer/SourceAdaptor/swissprot.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/swissprot.pm cp lib/Bio/Das/ProServer/SourceAdaptor/Transport/getz.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/Transport/getz.pm cp lib/Bio/Das/ProServer/SourceAdaptor/simple_volmap.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/simple_volmap.pm cp lib/Bio/Das/ProServer/SourceAdaptor/pfam.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/pfam.pm cp lib/Bio/Das/ProServer/SourceAdaptor/pfamOtherFeatures.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/pfamOtherFeatures.pm cp lib/Bio/Das/ProServer/SourceAdaptor/zfmodels_array.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/zfmodels_array.pm cp lib/Bio/Das/ProServer/SourceAdaptor/hugo.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/hugo.pm cp lib/Bio/Das/ProServer/SourceHydra/simplescoreh_db.pm blib/lib/Bio/Das/ProServer/SourceHydra/simplescoreh_db.pm cp lib/Bio/Das/ProServer/SourceAdaptor/zfmodels_insmut.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/zfmodels_insmut.pm cp lib/Bio/Das/ProServer/SourceAdaptor/team87_designs.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/team87_designs.pm cp lib/Bio/Das/ProServer/SourceAdaptor/hs35_clone.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/hs35_clone.pm cp lib/Bio/Das/ProServer/SourceAdaptor/ens_ncbi_35_morbid.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/ens_ncbi_35_morbid.pm cp lib/Bio/Das/ProServer/SourceAdaptor/zfmodels_est.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/zfmodels_est.pm cp lib/Bio/Das/ProServer/SourceAdaptor/snp_Zv5.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/snp_Zv5.pm cp lib/Bio/Das/ProServer/SourceAdaptor/interpro_mole.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/interpro_mole.pm cp lib/Bio/Das/ProServer/SourceAdaptor/cosmic_ncbi_35.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/cosmic_ncbi_35.pm cp lib/Bio/Das/ProServer/SourceAdaptor/tilepath.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/tilepath.pm cp lib/Bio/Das/ProServer/SourceAdaptor/pig_ends_all_35.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/pig_ends_all_35.pm cp lib/Bio/Das/ProServer/SourceHydra/ppid.pm blib/lib/Bio/Das/ProServer/SourceHydra/ppid.pm cp lib/Bio/Das/ProServer/SourceAdaptor/pfamFullAlign.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/pfamFullAlign.pm cp lib/Bio/Das/ProServer/SourceAdaptor/proxy.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/proxy.pm cp lib/Bio/Das/ProServer/SourceAdaptor/all_in_group.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/all_in_group.pm cp lib/Bio/Das/ProServer/SourceAdaptor/Transport/csv.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/Transport/csv.pm cp lib/Bio/Das/ProServer/SourceAdaptor/ensembl_upload.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/ensembl_upload.pm cp lib/Bio/Das/ProServer/SourceAdaptor/cosmic_ncbi_36_mutations.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/cosmic_ncbi_36_mutations.pm cp lib/Bio/Das/ProServer/SourceAdaptor/Transport/wgetz.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/Transport/wgetz.pm cp lib/Bio/Das/ProServer/SourceAdaptor/upload_euf.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/upload_euf.pm cp lib/Bio/Das/ProServer/SourceAdaptor/genetarget_db.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/genetarget_db.pm cp lib/Bio/Das/ProServer/SourceAdaptor/simple_interaction.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/simple_interaction.pm cp lib/Bio/Das/ProServer/SourceAdaptor/ens_genexrefs.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/ens_genexrefs.pm cp lib/Bio/Das/ProServer/SourceAdaptor/gtfdb.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/gtfdb.pm cp lib/Bio/Das/ProServer/SourceAdaptor/cosmic_ncbi_36_transcripts.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/cosmic_ncbi_36_transcripts.pm cp lib/Bio/Das/ProServer/SourceAdaptor/snp_Zv4.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/snp_Zv4.pm cp lib/Bio/Das/ProServer/SourceAdaptor/zfmodels_morpholino.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/zfmodels_morpholino.pm cp lib/Bio/Das/ProServer/SourceAdaptor/hs34_20_clone.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/hs34_20_clone.pm cp lib/Bio/Das/ProServer/SourceAdaptor/Transport/pfetch.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/Transport/pfetch.pm cp lib/Bio/Das/ProServer/SourceAdaptor/gene_pro_db.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/gene_pro_db.pm cp lib/Bio/Das/ProServer/SourceAdaptor/zfish_exons.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/zfish_exons.pm cp lib/Bio/Das/ProServer/SourceAdaptor/simpledb.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/simpledb.pm cp lib/Bio/Das/ProServer/SourceAdaptor/genetrap.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/genetrap.pm cp lib/Bio/Das/ProServer/SourceAdaptor/pdbStructure.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/pdbStructure.pm cp lib/Bio/Das/ProServer/SourceAdaptor/cegg_dbi.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/cegg_dbi.pm cp lib/Bio/Das/ProServer/SourceAdaptor/ensgenes.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/ensgenes.pm cp lib/Bio/Das/ProServer/SourceAdaptor/zfmodels_tilling.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/zfmodels_tilling.pm cp lib/Bio/Das/ProServer/SourceAdaptor/Transport/file.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/Transport/file.pm cp lib/Bio/Das/ProServer/SourceAdaptor/Transport/ensembl.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/Transport/ensembl.pm cp lib/Bio/Das/ProServer/SourceAdaptor/CNVDB.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/CNVDB.pm cp lib/Bio/Das/ProServer/SourceAdaptor/pfamAlign.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/pfamAlign.pm cp lib/Bio/Das/ProServer/SourceAdaptor/Transport/mole.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/Transport/mole.pm cp lib/Bio/Das/ProServer/SourceAdaptor/pfamSeedAlign.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/pfamSeedAlign.pm cp lib/Bio/Das/ProServer/SourceAdaptor.pm blib/lib/Bio/Das/ProServer/SourceAdaptor.pm cp lib/Bio/Das/ProServer/SourceAdaptor/mitocheck_oligos.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/mitocheck_oligos.pm cp lib/Bio/Das/ProServer/SourceAdaptor/Transport/bioseqio.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/Transport/bioseqio.pm cp lib/Bio/Das/ProServer/SourceAdaptor/styletest.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/styletest.pm cp lib/Bio/Das/ProServer/SourceAdaptor/Transport/dbi.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/Transport/dbi.pm cp lib/Bio/Das/ProServer/SourceAdaptor/Transport/generic.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/Transport/generic.pm cp lib/Bio/Das/ProServer/SourceAdaptor/decipher_cnv.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/decipher_cnv.pm cp lib/Bio/Das/ProServer/SourceHydra.pm blib/lib/Bio/Das/ProServer/SourceHydra.pm cp lib/Bio/Das/ProServer/SourceAdaptor/Transport/oracle.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/Transport/oracle.pm cp lib/Bio/Das/ProServer/SourceAdaptor/mungeonscore.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/mungeonscore.pm cp lib/Bio/Das/ProServer/SourceAdaptor/simple.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/simple.pm cp lib/Bio/Das/ProServer/SourceAdaptor/agp.pm blib/lib/Bio/Das/ProServer/SourceAdaptor/agp.pm Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::decipher.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::cosmic.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::jgi_dbi.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::cosmic_genomic.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::indel_Zv4.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::indel_Zv5.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::bioseq.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::cache.3 Manifying blib/man3/Bio::Das::ProServer::SourceHydra::dbi.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::mirna.3 Manifying blib/man3/Bio::Das::ProServer.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::simplescore_db.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::chori_243.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::swissprot.3 Manifying blib/man3/Bio::Das::ProServer::Config.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::Transport::getz.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::simple_volmap.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::pfam.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::pfamOtherFeatures.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::zfmodels_array.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::hugo.3 Manifying blib/man3/Bio::Das::ProServer::SourceHydra::simplescoreh_db.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::zfmodels_insmut.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::hs35_clone.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::ens_ncbi_35_morbid.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::zfmodels_est.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::snp_Zv5.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::interpro_mole.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::cosmic_ncbi_35.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::tilepath.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::pig_ends_all_35.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::pfamFullAlign.3 Manifying blib/man3/Bio::Das::ProServer::SourceHydra::ppid.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::all_in_group.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::Transport::csv.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::ensembl_upload.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::Transport::wgetz.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::upload_euf.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::simple_interaction.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::ens_genexrefs.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::gtfdb.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::snp_Zv4.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::zfmodels_morpholino.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::hs34_20_clone.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::Transport::pfetch.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::zfish_exons.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::simpledb.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::genetrap.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::pdbStructure.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::ensgenes.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::cegg_dbi.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::Transport::file.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::Transport::ensembl.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::pfamAlign.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::CNVDB.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::Transport::mole.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::pfamSeedAlign.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::Transport::bioseqio.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::mitocheck_oligos.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::Transport::dbi.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::Transport::generic.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::Transport::oracle.3 Manifying blib/man3/Bio::Das::ProServer::SourceHydra.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::simple.3 Manifying blib/man3/Bio::Das::ProServer::SourceAdaptor::agp.3 PERL_DL_NONLAZY=1 /export/home/cpanrun/build/5.8.0/bin/perl "-MExtUtils::Command::MM" "-e" "test_harness(1, 'blib/lib', 'blib/arch')" t/*.t t/00-pod...................1..0 # Skip Test::Pod 1.00 required for testing POD skipped all skipped: Test::Pod 1.00 required for testing POD t/01-pod-u-like............Can't locate Test/Pod/Coverage.pm in @INC (@INC contains: /export/home/cpanrun/depot/main/contrib-patched/perl/CPAN/src/Bio-Das-ProServer/blib/lib /export/home/cpanrun/depot/main/contrib-patched/perl/CPAN/src/Bio-Das-ProServer/blib/arch /export/home/cpanrun/depot/main/Apps/CPAN_Run/lib /export/home/cpanrun/build/5.8.0/lib/5.8.0/sun4-solaris-thread-multi /export/home/cpanrun/build/5.8.0/lib/5.8.0/sun4-solaris-thread-multi /export/home/cpanrun/build/5.8.0/lib/5.8.0 /export/home/cpanrun/build/5.8.0/lib/site_perl/5.8.0/sun4-solaris-thread-multi /export/home/cpanrun/build/5.8.0/lib/site_perl/5.8.0/sun4-solaris-thread-multi /export/home/cpanrun/build/5.8.0/lib/site_perl/5.8.0 /export/home/cpanrun/build/5.8.0/lib/site_perl/5.8.0/sun4-solaris-thread-multi /export/home/cpanrun/build/5.8.0/lib/site_perl/5.8.0 /export/home/cpanrun/build/5.8.0/lib/site_perl . /export/home/cpanrun/build/5.8.0/lib/5.8.0/sun4-solaris-thread-multi /export/home/cpanrun/build/5.8.0/lib/5.8.0 /export/home/cpanrun/build/5.8.0/lib/site_perl/5.8.0/sun4-solaris-thread-multi /export/home/cpanrun/build/5.8.0/lib/site_perl/5.8.0 /export/home/cpanrun/build/5.8.0/lib/site_perl .) at t/01-pod-u-like.t line 4. BEGIN failed--compilation aborted at t/01-pod-u-like.t line 4. skipped all skipped: no reason given t/05-config................1..14 ok 1 - use Bio::Das::ProServer::Config; ok 2 - The object isa Bio::Das::ProServer::Config ok 3 - default port is ok ok 4 - default maxclients is ok ok 5 - maxclients get/set ok ok 6 - default pidfile is undef ok 7 - default logfile is undef ok 8 - sys::hostname is passed through ok ok 9 - no adaptors by default ok 10 - generic adaptor creation ok isa Bio::Das::ProServer::SourceAdaptor ok 11 - fictitious adaptor is unknown ok 12 - default version is ok ok 13 - default hydra-based sourceadaptor is undef ok 14 - default hydraadaptor is undef ok t/10-sourceadaptor-hugo....1..5 ok 1 - use Bio::Das::ProServer::SourceAdaptor::hugo; ok 2 - The object isa Bio::Das::ProServer::SourceAdaptor::hugo ok 3 - Bio::Das::ProServer::SourceAdaptor::hugo->can(...) ok 4 - The object isa Bio::Das::ProServer::SourceAdaptor::Transport::dummy ok 5 ok t/10-sourceadaptor.........1..23 ok 1 - use Bio::Das::ProServer::SourceAdaptor; ok 2 - The object isa Bio::Das::ProServer::SourceAdaptor ok 3 - Bio::Das::ProServer::SourceAdaptor->can(...) ok 4 - init is undef ok 5 - length is 0 by default ok 6 - mapmaster is undef ok 7 - title == dsn ok 8 - description == title ok 9 - init_segments is undef ok 10 - known_segments is undef ok 11 - segment_version is undef ok 12 - dsn is unknown ok 13 - dsn version is 1.0 ok 14 - dsn created date is zero (epoch) ok 15 - dsn created date is zero (epoch) ok 16 - start is 1 ok 17 - end == length ok 18 - config is a hash isa HASH ok 19 - config get/set ok ok 20 - file transport created ok isa Bio::Das::ProServer::SourceAdaptor::Transport::file ok 21 - implements dsn ok ok 22 - implements without arg gives undef ok 23 - das_capabilities gives a basic dsn/1.0 ok t/11-transport-dbi.........1..3 ok 1 - use Bio::Das::ProServer::SourceAdaptor::Transport::dbi; ok 2 - The object isa Bio::Das::ProServer::SourceAdaptor::Transport::dbi ok 3 - Bio::Das::ProServer::SourceAdaptor::Transport::dbi->can(...) ok t/11-transport-file........1..3 ok 1 - use Bio::Das::ProServer::SourceAdaptor::Transport::file; ok 2 - The object isa Bio::Das::ProServer::SourceAdaptor::Transport::file ok 3 - Bio::Das::ProServer::SourceAdaptor::Transport::file->can(...) ok t/11-transport-generic.....1..8 ok 1 - use Bio::Das::ProServer::SourceAdaptor::Transport::generic; ok 2 - The object isa Bio::Das::ProServer::SourceAdaptor::Transport::generic ok 3 - The object isa Bio::Das::ProServer::SourceAdaptor::Transport::generic ok 4 ok 5 ok 6 - The object isa Bio::Das::ProServer::SourceAdaptor::Transport::generic ok 7 ok 8 ok t/11-transport-oracle......1..0 # Skip Oracle transport requires DBI and DBD::Oracle modules skipped all skipped: Oracle transport requires DBI and DBD::Oracle modules t/15-escaping..............1..1 ok 1 - escaped response ok t/16-targets...............1..1 ok 1 - target response ok t/25-alignment.............1..1 ok 1 - alignments ok t/26-interaction...........1..1 ok 1 - interactions ok t/27-volmap................1..3 ok 1 - volmap-EMD1017 ok 2 - volmap-EMD1018 ok 3 - volmap-EMD1019 ok All tests successful, 3 tests skipped. Files=14, Tests=63, 15 wallclock secs (11.01 cusr + 2.57 csys = 13.58 CPU) Installing /export/home/cpanrun/build/5.8.0/lib/site_perl/5.8.0/Bio/Das/ProServer.pm Installing /export/home/cpanrun/build/5.8.0/lib/site_perl/5.8.0/Bio/Das/ProServer/Config.pm Installing /export/home/cpanrun/build/5.8.0/lib/site_perl/5.8.0/Bio/Das/ProServer/SourceAdaptor.pm Installing /export/home/cpanrun/build/5.8.0/lib/site_perl/5.8.0/Bio/Das/ProServer/SourceHydra.pm Installing /export/home/cpanrun/build/5.8.0/lib/site_perl/5.8.0/Bio/Das/ProServer/SourceHydra/dbi.pm Installing /export/home/cpanrun/build/5.8.0/lib/site_perl/5.8.0/Bio/Das/ProServer/SourceHydra/simplescoreh_db.pm Installing /export/home/cpanrun/build/5.8.0/lib/site_perl/5.8.0/Bio/Das/ProServer/SourceHydra/ppid.pm Installing /export/home/cpanrun/build/5.8.0/lib/site_perl/5.8.0/Bio/Das/ProServer/SourceAdaptor/decipher.pm Installing /export/home/cpanrun/build/5.8.0/lib/site_perl/5.8.0/Bio/Das/ProServer/SourceAdaptor/cosmic.pm Installing /export/home/cpanrun/build/5.8.0/lib/site_perl/5.8.0/Bio/Das/ProServer/SourceAdaptor/jgi_dbi.pm Installing /export/home/cpanrun/build/5.8.0/lib/site_perl/5.8.0/Bio/Das/ProServer/SourceAdaptor/cosmic_genomic.pm Installing /export/home/cpanrun/build/5.8.0/lib/site_perl/5.8.0/Bio/Das/ProServer/SourceAdaptor/indel_Zv4.pm Installing /export/home/cpanrun/build/5.8.0/lib/site_perl/5.8.0/Bio/Das/ProServer/SourceAdaptor/bioseq.pm Installing /export/home/cpanrun/build/5.8.0/lib/site_perl/5.8.0/Bio/Das/ProServer/SourceAdaptor/indel_Zv5.pm Installing /export/home/cpanrun/build/5.8.0/lib/site_perl/5.8.0/Bio/Das/ProServer/SourceAdaptor/cache.pm Installing /export/home/cpanrun/build/5.8.0/lib/site_perl/5.8.0/Bio/Das/ProServer/SourceAdaptor/grouped_db.pm Installing /export/home/cpanrun/build/5.8.0/lib/site_perl/5.8.0/Bio/Das/ProServer/SourceAdaptor/mirna.pm Installing /export/home/cpanrun/build/5.8.0/lib/site_perl/5.8.0/Bio/Das/ProServer/SourceAdaptor/simplescore_db.pm Installing /export/home/cpanrun/build/5.8.0/lib/site_perl/5.8.0/Bio/Das/ProServer/SourceAdaptor/chori_243.pm Installing /export/home/cpanrun/build/5.8.0/lib/site_perl/5.8.0/Bio/Das/ProServer/SourceAdaptor/swissprot.pm Installing /export/home/cpanrun/build/5.8.0/lib/site_perl/5.8.0/Bio/Das/ProServer/SourceAdaptor/simple_volmap.pm Installing /export/home/cpanrun/build/5.8.0/lib/site_perl/5.8.0/Bio/Das/ProServer/SourceAdaptor/pfam.pm Installing /export/home/cpanrun/build/5.8.0/lib/site_perl/5.8.0/Bio/Das/ProServer/SourceAdaptor/pfamOtherFeatures.pm Installing /export/home/cpanrun/build/5.8.0/lib/site_perl/5.8.0/Bio/Das/ProServer/SourceAdaptor/zfmodels_array.pm Installing /export/home/cpanrun/build/5.8.0/lib/site_perl/5.8.0/Bio/Das/ProServer/SourceAdaptor/hugo.pm Installing /export/home/cpanrun/build/5.8.0/lib/site_perl/5.8.0/Bio/Das/ProServer/SourceAdaptor/zfmodels_insmut.pm Installing /export/home/cpanrun/build/5.8.0/lib/site_perl/5.8.0/Bio/Das/ProServer/SourceAdaptor/hs35_clone.pm Installing 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/export/home/cpanrun/build/5.8.0/man/man3/Bio::Das::ProServer::SourceAdaptor::pfamSeedAlign.3 Installing /export/home/cpanrun/build/5.8.0/man/man3/Bio::Das::ProServer::SourceAdaptor::Transport::bioseqio.3 Installing /export/home/cpanrun/build/5.8.0/man/man3/Bio::Das::ProServer::SourceAdaptor.3 Installing /export/home/cpanrun/build/5.8.0/man/man3/Bio::Das::ProServer::SourceAdaptor::mitocheck_oligos.3 Installing /export/home/cpanrun/build/5.8.0/man/man3/Bio::Das::ProServer::SourceAdaptor::Transport::dbi.3 Installing /export/home/cpanrun/build/5.8.0/man/man3/Bio::Das::ProServer::SourceAdaptor::Transport::generic.3 Installing /export/home/cpanrun/build/5.8.0/man/man3/Bio::Das::ProServer::SourceAdaptor::Transport::oracle.3 Installing /export/home/cpanrun/build/5.8.0/man/man3/Bio::Das::ProServer::SourceHydra.3 Installing /export/home/cpanrun/build/5.8.0/man/man3/Bio::Das::ProServer::SourceAdaptor::simple.3 Installing /export/home/cpanrun/build/5.8.0/man/man3/Bio::Das::ProServer::SourceAdaptor::agp.3 Appending installation info to /export/home/cpanrun/build/5.8.0/lib/5.8.0/sun4-solaris-thread-multi/perllocal.pod