Checking if your kit is complete... Warning: prerequisite Carp 1.02 not found at /home/cpanrun/build/5.6.1/lib/5.6.1/ExtUtils/MakeMaker.pm line 343. Warning: prerequisite English 1.01 not found at /home/cpanrun/build/5.6.1/lib/5.6.1/ExtUtils/MakeMaker.pm line 343. Warning: prerequisite HTTP::Headers 1.64 not found at /home/cpanrun/build/5.6.1/lib/5.6.1/ExtUtils/MakeMaker.pm line 343. Warning: prerequisite HTTP::Request 1.4 not found at /home/cpanrun/build/5.6.1/lib/5.6.1/ExtUtils/MakeMaker.pm line 343. Warning: prerequisite SOAP::Lite 0.69 not found at /home/cpanrun/build/5.6.1/lib/5.6.1/ExtUtils/MakeMaker.pm line 343. Looks good 'LICENSE' is not a known MakeMaker parameter name. Writing Makefile for Bio::Das::Lite ****************************************************************************** ** Some of the tests for this module need internet access ** ** Also remember to set your http_proxy environment variable if you need to ** ****************************************************************************** cp lib/Bio/Das/Lite/UserAgent.pm blib/lib/Bio/Das/Lite/UserAgent.pm cp lib/Bio/DasLite.pm blib/lib/Bio/DasLite.pm cp lib/Bio/Das/Lite.pm blib/lib/Bio/Das/Lite.pm cp lib/Bio/Das/Lite/UserAgent/proxy.pm blib/lib/Bio/Das/Lite/UserAgent/proxy.pm Manifying blib/man3/Bio::Das::Lite::UserAgent.3 Manifying blib/man3/Bio::DasLite.3 Manifying blib/man3/Bio::Das::Lite.3 Manifying blib/man3/Bio::Das::Lite::UserAgent::proxy.3 PERL_DL_NONLAZY=1 /home/cpanrun/build/5.6.1/bin/perl -Iblib/arch -Iblib/lib -I/home/cpanrun/build/5.6.1/lib/5.6.1/i686-linux-thread-multi -I/home/cpanrun/build/5.6.1/lib/5.6.1 -e 'use Test::Harness qw(&runtests $verbose); $verbose=1; runtests @ARGV;' t/*.t t/00-critic.........1..0 # Skip Author test. Set $ENV{TEST_AUTHOR} to a true value to run. skipped: Author test. Set $ENV{TEST_AUTHOR} to a true value to run. t/00-distribution...1..0 # Skip Test::Distribution not installed skipped: Test::Distribution not installed t/00-pod............1..0 # Skip Test::Pod 1.00 required for testing POD skipped: Test::Pod 1.00 required for testing POD t/00-podcoverage....1..0 # Skip Test::Pod::Coverage 1.00 required for testing POD coverage skipped: Test::Pod::Coverage 1.00 required for testing POD coverage t/01-compat-general.1..7 ok 1 - isa ok 2 - get/set timeout ok 3 - get/set http_proxy ok 4 - plain http fetch ok 5 - feature-by-id returned a list ok 6 - feature-by=id returned one or no elements ok 7 - feature-by-id element was a hash ok t/01-general........1..7 ok 1 - The object isa Bio::Das::Lite ok 2 - get/set timeout ok 3 - get/set http_proxy ok 4 - plain http fetch ok 5 - feature-by-id returned a list ok 6 - feature-by=id returned one or no elements ok 7 - feature-by-id element was a hash ok t/05-compat-singledsn.1..70 ok 1 - new with a single dsn returned something ok 2 - single service get gave an array ref ok 3 - single service get had length of one ok 4 - single service get returned the same dsn ok 5 - dsns call returned something ok 6 - dsns call gave a hash ok 7 - dsns call gave one key ok 8 - dsns call gave a arrayref value for the one key ok 9 - dsns call returned at least one source ok 10 - all sources parsed correctly into hashes ok 11 - new with a single dsn returned something ok 12 - single service get gave an array ref ok 13 - single service get had length of one ok 14 - single service get returned the same dsn ok 15 - dsns call returned something ok 16 - dsns call gave a hash ok 17 - dsns call gave one key ok 18 - dsns call gave a arrayref value for the one key ok 19 - dsns call returned at least one source ok 20 - all sources parsed correctly into hashes ok 21 - new with a single dsn returned something ok 22 - single service get gave an array ref ok 23 - single service get had length of one ok 24 - single service get returned the same dsn ok 25 - dsns call returned something ok 26 - dsns call gave a hash ok 27 - dsns call gave one key ok 28 - dsns call gave a arrayref value for the one key ok 29 - dsns call returned at least one source ok 30 - all sources parsed correctly into hashes ok 31 - new with a single dsn returned something ok 32 - single service get gave an array ref ok 33 - single service get had length of one ok 34 - single service get returned the same dsn ok 35 - dsns call returned something ok 36 - dsns call gave a hash ok 37 - dsns call gave one key ok 38 - dsns call gave a arrayref value for the one key ok 39 - dsns call returned at least one source ok 40 - all sources parsed correctly into hashes ok 41 - new with a single dsn returned something ok 42 - single service get gave an array ref ok 43 - single service get had length of one ok 44 - single service get returned the same dsn ok 45 - dsns call returned something ok 46 - dsns call gave a hash ok 47 - dsns call gave one key ok 48 - dsns call gave a arrayref value for the one key ok 49 - dsns call returned at least one source ok 50 - all sources parsed correctly into hashes ok 51 - new with a single dsn returned something ok 52 - single service get gave an array ref ok 53 - single service get had length of one ok 54 - single service get returned the same dsn ok 55 - dsns call returned something ok 56 - dsns call gave a hash ok 57 - dsns call gave one key ok 58 - dsns call gave a arrayref value for the one key ok 59 - dsns call returned at least one source ok 60 - all sources parsed correctly into hashes ok 61 - new with a single dsn returned something ok 62 - single service get gave an array ref ok 63 - single service get had length of one ok 64 - single service get returned the same dsn ok 65 - dsns call returned something ok 66 - dsns call gave a hash ok 67 - dsns call gave one key ok 68 - dsns call gave a arrayref value for the one key ok 69 - dsns call returned at least one source ok 70 - all sources parsed correctly into hashes ok t/05-singledsn......1..70 ok 1 - new with a single dsn returned something ok 2 - single service get gave an array ref ok 3 - single service get had length of one ok 4 - single service get returned the same dsn ok 5 - dsns call returned something ok 6 - dsns call gave a hash ok 7 - dsns call gave one key ok 8 - dsns call gave a arrayref value for the one key ok 9 - dsns call returned at least one source ok 10 - all sources parsed correctly into hashes ok 11 - new with a single dsn returned something ok 12 - single service get gave an array ref ok 13 - single service get had length of one ok 14 - single service get returned the same dsn ok 15 - dsns call returned something ok 16 - dsns call gave a hash ok 17 - dsns call gave one key ok 18 - dsns call gave a arrayref value for the one key ok 19 - dsns call returned at least one source ok 20 - all sources parsed correctly into hashes ok 21 - new with a single dsn returned something ok 22 - single service get gave an array ref ok 23 - single service get had length of one ok 24 - single service get returned the same dsn ok 25 - dsns call returned something ok 26 - dsns call gave a hash ok 27 - dsns call gave one key ok 28 - dsns call gave a arrayref value for the one key ok 29 - dsns call returned at least one source ok 30 - all sources parsed correctly into hashes ok 31 - new with a single dsn returned something ok 32 - single service get gave an array ref ok 33 - single service get had length of one ok 34 - single service get returned the same dsn ok 35 - dsns call returned something ok 36 - dsns call gave a hash ok 37 - dsns call gave one key ok 38 - dsns call gave a arrayref value for the one key ok 39 - dsns call returned at least one source ok 40 - all sources parsed correctly into hashes ok 41 - new with a single dsn returned something ok 42 - single service get gave an array ref ok 43 - single service get had length of one ok 44 - single service get returned the same dsn ok 45 - dsns call returned something ok 46 - dsns call gave a hash ok 47 - dsns call gave one key ok 48 - dsns call gave a arrayref value for the one key ok 49 - dsns call returned at least one source ok 50 - all sources parsed correctly into hashes ok 51 - new with a single dsn returned something ok 52 - single service get gave an array ref ok 53 - single service get had length of one ok 54 - single service get returned the same dsn ok 55 - dsns call returned something ok 56 - dsns call gave a hash ok 57 - dsns call gave one key ok 58 - dsns call gave a arrayref value for the one key ok 59 - dsns call returned at least one source ok 60 - all sources parsed correctly into hashes ok 61 - new with a single dsn returned something ok 62 - single service get gave an array ref ok 63 - single service get had length of one ok 64 - single service get returned the same dsn ok 65 - dsns call returned something ok 66 - dsns call gave a hash ok 67 - dsns call gave one key ok 68 - dsns call gave a arrayref value for the one key ok 69 - dsns call returned at least one source ok 70 - all sources parsed correctly into hashes ok t/06-compat-singledsn-singleseg.1..13 ok 1 - entry_points returns a hash ok 2 - entry_points returns the same number of sources ok 3 - entry_points hash contains an array ok 4 - types returns a hash ok 5 - types returns the same number of sources ok 6 - types hash contains an array ok 7 - features returns a hash ok 8 - features returns the same number of sources ok 9 - features hash contains an array ok 10 - sequence returns a hash ok 11 - sequence returns the same number of sources ok 12 - sequence hash contains an array ok 13 - requesting 1Kb of sequence returns 1Kb ok t/06-singledsn-singleseg.1..13 ok 1 - entry_points returns a hash ok 2 - entry_points returns the same number of sources ok 3 - entry_points hash contains an array ok 4 - types returns a hash ok 5 - types returns the same number of sources ok 6 - types hash contains an array ok 7 - features returns a hash ok 8 - features returns the same number of sources ok 9 - features hash contains an array ok 10 - sequence returns a hash ok 11 - sequence returns the same number of sources ok 12 - sequence hash contains an array ok 13 - requesting 1Kb of sequence returns 1Kb ok t/07-compat-singledsn-multiseg.1..10 ok 1 - features returns a hash ok 2 - features returns data to the tune of (number of sources * number of segments) ok 3 - features hash contains an array ok 4 - features returns some data ok 5 - features returns some data ok 6 - sequence returns a hash ok 7 - sequence returns data to the tune of (number of sources * number of segments) ok 8 - sequence hash contains an array ok 9 - sequence returns some data ok 10 - sequence returns some data ok t/07-singledsn-multiseg.1..10 ok 1 - features returns a hash ok 2 - features returns data to the tune of (number of sources * number of segments) ok 3 - features hash contains an array ok 4 - features returns some data ok 5 - features returns some data ok 6 - sequence returns a hash ok 7 - sequence returns data to the tune of (number of sources * number of segments) ok 8 - sequence hash contains an array ok 9 - sequence returns some data ok 10 - sequence returns some data ok t/10-compat-multidsn.1..10 ok 1 - new with a multi dsn returned something ok 2 - multi service get gave an array ref ok 3 - multi service get had length of one ok 4 - multi service get returned the same dsns in the same order ok 5 - dsns call returned something ok 6 - dsns call gave a hash ok 7 - dsns call gave one key ok 8 - dsns call gave a arrayref value for the one key ok 9 - dsns call returned at least one source ok 10 - all sources parsed correctly into hashes ok t/10-multidsn.......1..10 ok 1 - new with a multi dsn returned something ok 2 - multi service get gave an array ref ok 3 - multi service get had length of one ok 4 - multi service get returned the same dsns in the same order ok 5 - dsns call returned something ok 6 - dsns call gave a hash ok 7 - dsns call gave one key ok 8 - dsns call gave a arrayref value for the one key ok 9 - dsns call returned at least one source ok 10 - all sources parsed correctly into hashes ok t/20-authentication.1..3 ok 1 - http_proxy processed ok ok 2 - proxy_user processed ok ok 3 - proxy_pass processed ok ok t/20-compat-authentication.1..3 ok 1 - http_proxy processed ok ok 2 - proxy_user processed ok ok 3 - proxy_pass processed ok ok t/40-dna............1..1 ok 1 - is_deeply ok t/45-sequence.......1..1 ok 1 - is_deeply ok t/50-compat-entry_points.1..1 ok 1 - Correct number of segments returned ok t/50-entry_points...1..1 ok 1 - Correct number of segments returned ok t/60-compat-features.1..1 ok 1 - Whole-response-mode gave correct number of features returned ok t/60-compat-features_chunked.1..1 ok 1 - Chunked-response-mode gave number of features returned ok t/60-compat-features_empty.1..5 ok 1 - Empty segment gives a hash with seginfo rather than an empty array of features ok 2 - segment_id ok 3 - segment_version ok 4 - segment_start ok 5 - segment_stop ok t/60-features.......1..1 ok 1 - Whole-response-mode gave correct number of features returned ok t/60-features_chunked.1..1 ok 1 - Chunked-response-mode gave number of features returned ok t/60-features_empty.1..5 ok 1 - Empty segment gives a hash with seginfo rather than an empty array of features ok 2 - segment_id ok 3 - segment_version ok 4 - segment_start ok 5 - segment_stop ok t/61-compat-features_group.1..5 ok 1 - Corrent number of links returned ok 2 - Corrent number of notes returned ok 3 - Correct link href ok 4 - Correct link text ok 5 - Correct note text ok t/61-features_group.1..5 ok 1 - Corrent number of links returned ok 2 - Corrent number of notes returned ok 3 - Correct link href ok 4 - Correct link text ok 5 - Correct note text ok t/70-alignment......1..4 ok 1 - Whole-response-mode gave correct number of features returned ok 2 - Got expected number of alignment objects ok 3 - Got expected number of alignment blocks ok 4 - Got cigar string ok t/80-structure......1..9 ok 1 - Whole-response-mode gave correct structure ok 2 - Got the correct number of chains ok 3 - Got the correct number of groups for the chain ok 4 - Got the correct number of atoms for the first group ok 5 - Got the correct number of het ok 6 - Got the correct number of groups for the het ok 7 - Got the correct number of atoms for the first group ok 8 - Got connection data ok 9 - Got correct number of atoms in connection ok t/90-sources........1..2 ok 1 - Whole-response-mode gave correct number of sources returned ok 2 - Got maintainers email ok All tests successful, 4 tests skipped. Files=31, Tests=269, 69 wallclock secs (48.93 cusr + 1.99 csys = 50.92 CPU) Installing /home/cpanrun/build/5.6.1/lib/site_perl/5.6.1/Bio/DasLite.pm Installing /home/cpanrun/build/5.6.1/lib/site_perl/5.6.1/Bio/Das/Lite.pm Installing /home/cpanrun/build/5.6.1/lib/site_perl/5.6.1/Bio/Das/Lite/UserAgent.pm Installing /home/cpanrun/build/5.6.1/lib/site_perl/5.6.1/Bio/Das/Lite/UserAgent/proxy.pm Installing /home/cpanrun/build/5.6.1/man/man3/Bio::Das::Lite::UserAgent.3 Installing /home/cpanrun/build/5.6.1/man/man3/Bio::DasLite.3 Installing /home/cpanrun/build/5.6.1/man/man3/Bio::Das::Lite.3 Installing /home/cpanrun/build/5.6.1/man/man3/Bio::Das::Lite::UserAgent::proxy.3 Appending installation info to /home/cpanrun/build/5.6.1/lib/5.6.1/i686-linux-thread-multi/perllocal.pod