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Writing Makefile for CompBio::DB
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Writing Makefile for CompBio::Simple::ArrayFile
Writing Makefile for CompBio::Simple
Writing Makefile for CompBio
cp CompBio.pm blib/lib/CompBio.pm
make[1]: Entering directory `/home/cpanrun/depot/main/contrib-patched/perl/CPAN/src/CompBio/DB'
cp DB.pm ../blib/lib/CompBio/DB.pm
cp bin/dbaccess ../blib/script/dbaccess
/home/cpanrun/tmp/5.8.0/bin/perl "-MExtUtils::MY" -e "MY->fixin(shift)" ../blib/script/dbaccess
cp bin/get_blast ../blib/script/get_blast
/home/cpanrun/tmp/5.8.0/bin/perl "-MExtUtils::MY" -e "MY->fixin(shift)" ../blib/script/get_blast
cp bin/get_seq ../blib/script/get_seq
/home/cpanrun/tmp/5.8.0/bin/perl "-MExtUtils::MY" -e "MY->fixin(shift)" ../blib/script/get_seq
cp bin/get_def ../blib/script/get_def
/home/cpanrun/tmp/5.8.0/bin/perl "-MExtUtils::MY" -e "MY->fixin(shift)" ../blib/script/get_def
cp bin/get_org ../blib/script/get_org
/home/cpanrun/tmp/5.8.0/bin/perl "-MExtUtils::MY" -e "MY->fixin(shift)" ../blib/script/get_org
Manifying ../blib/man3/CompBio::DB.3
Manifying ../blib/man1/dbaccess.1
Manifying ../blib/man1/get_def.1
Manifying ../blib/man1/get_seq.1
make[1]: Leaving directory `/home/cpanrun/depot/main/contrib-patched/perl/CPAN/src/CompBio/DB'
make[1]: Entering directory `/home/cpanrun/depot/main/contrib-patched/perl/CPAN/src/CompBio/Simple'
cp Simple.pm ../blib/lib/CompBio/Simple.pm
make[2]: Entering directory `/home/cpanrun/depot/main/contrib-patched/perl/CPAN/src/CompBio/Simple/ArrayFile'
cp ArrayFile.pm ../../blib/lib/CompBio/Simple/ArrayFile.pm
Manifying ../../blib/man3/CompBio::Simple::ArrayFile.3
make[2]: Leaving directory `/home/cpanrun/depot/main/contrib-patched/perl/CPAN/src/CompBio/Simple/ArrayFile'
Manifying ../blib/man3/CompBio::Simple.3
make[1]: Leaving directory `/home/cpanrun/depot/main/contrib-patched/perl/CPAN/src/CompBio/Simple'
cp bin/ig_to_tbl blib/script/ig_to_tbl
/home/cpanrun/tmp/5.8.0/bin/perl "-MExtUtils::MY" -e "MY->fixin(shift)" blib/script/ig_to_tbl
cp bin/fa_to_tbl blib/script/fa_to_tbl
/home/cpanrun/tmp/5.8.0/bin/perl "-MExtUtils::MY" -e "MY->fixin(shift)" blib/script/fa_to_tbl
cp bin/tbl_to_fa blib/script/tbl_to_fa
/home/cpanrun/tmp/5.8.0/bin/perl "-MExtUtils::MY" -e "MY->fixin(shift)" blib/script/tbl_to_fa
cp bin/dna_to_aa blib/script/dna_to_aa
/home/cpanrun/tmp/5.8.0/bin/perl "-MExtUtils::MY" -e "MY->fixin(shift)" blib/script/dna_to_aa
cp bin/tbl_to_ig blib/script/tbl_to_ig
/home/cpanrun/tmp/5.8.0/bin/perl "-MExtUtils::MY" -e "MY->fixin(shift)" blib/script/tbl_to_ig
Manifying blib/man1/tbl_to_fa.1
Manifying blib/man1/fa_to_tbl.1
Manifying blib/man3/CompBio.3
Manifying blib/man1/dna_to_aa.1
make[1]: Entering directory `/home/cpanrun/depot/main/contrib-patched/perl/CPAN/src/CompBio/DB'
make[1]: Leaving directory `/home/cpanrun/depot/main/contrib-patched/perl/CPAN/src/CompBio/DB'
make[1]: Entering directory `/home/cpanrun/depot/main/contrib-patched/perl/CPAN/src/CompBio/Simple'
make[2]: Entering directory `/home/cpanrun/depot/main/contrib-patched/perl/CPAN/src/CompBio/Simple/ArrayFile'
make[2]: Leaving directory `/home/cpanrun/depot/main/contrib-patched/perl/CPAN/src/CompBio/Simple/ArrayFile'
make[1]: Leaving directory `/home/cpanrun/depot/main/contrib-patched/perl/CPAN/src/CompBio/Simple'
PERL_DL_NONLAZY=1 /home/cpanrun/tmp/5.8.0/bin/perl "-Iblib/lib" "-Iblib/arch" test.pl
1..11
ok 1 - use CompBio;
ok 2 - seqs loaded from DATA
ok 3 - new $cbc object created
ok 4 - check_type
ok 5 - dna_to_aa
ok 6 - tbl_to_fa
ok 7 - tbl_to_ig
ok 8 - fa_to_tbl
ok 9 - ig_to_tbl
ok 10 - six_frame
ok 11 - six_frame complement check
make[1]: Entering directory `/home/cpanrun/depot/main/contrib-patched/perl/CPAN/src/CompBio/DB'
PERL_DL_NONLAZY=1 /home/cpanrun/tmp/5.8.0/bin/perl "-I../blib/lib" "-I../blib/arch" test.pl
1..0 # Skip Can't perform tests without CompBio database
make[1]: Leaving directory `/home/cpanrun/depot/main/contrib-patched/perl/CPAN/src/CompBio/DB'
make[1]: Entering directory `/home/cpanrun/depot/main/contrib-patched/perl/CPAN/src/CompBio/Simple'
make[2]: Entering directory `/home/cpanrun/depot/main/contrib-patched/perl/CPAN/src/CompBio/Simple/ArrayFile'
make[2]: Leaving directory `/home/cpanrun/depot/main/contrib-patched/perl/CPAN/src/CompBio/Simple/ArrayFile'
PERL_DL_NONLAZY=1 /home/cpanrun/tmp/5.8.0/bin/perl "-I../blib/lib" "-I../blib/arch" test.pl
1..11
ok 1 - use CompBio::Simple;
ok 2 - seqs loaded from DATA
ok 3 - new $cbs object created
ok 4 - Simple::check_type
ok 5 - Simple::dna_to_aa
ok 6 - Simple::tbl_to_fa
ok 7 - Simple::tbl_to_ig
ok 8 - Simple::fa_to_tbl
ok 9 - Simple::ig_to_tbl
ok 10 - Simple::six_frame
ok 11 - six_frame complement check
make[2]: Entering directory `/home/cpanrun/depot/main/contrib-patched/perl/CPAN/src/CompBio/Simple/ArrayFile'
PERL_DL_NONLAZY=1 /home/cpanrun/tmp/5.8.0/bin/perl "-I../../blib/lib" "-I../../blib/arch" test.pl
1..1
ok 1
make[2]: Leaving directory `/home/cpanrun/depot/main/contrib-patched/perl/CPAN/src/CompBio/Simple/ArrayFile'
make[1]: Leaving directory `/home/cpanrun/depot/main/contrib-patched/perl/CPAN/src/CompBio/Simple'
make[1]: Entering directory `/home/cpanrun/depot/main/contrib-patched/perl/CPAN/src/CompBio/DB'
make[1]: Leaving directory `/home/cpanrun/depot/main/contrib-patched/perl/CPAN/src/CompBio/DB'
make[1]: Entering directory `/home/cpanrun/depot/main/contrib-patched/perl/CPAN/src/CompBio/Simple'
make[2]: Entering directory `/home/cpanrun/depot/main/contrib-patched/perl/CPAN/src/CompBio/Simple/ArrayFile'
make[2]: Leaving directory `/home/cpanrun/depot/main/contrib-patched/perl/CPAN/src/CompBio/Simple/ArrayFile'
make[1]: Leaving directory `/home/cpanrun/depot/main/contrib-patched/perl/CPAN/src/CompBio/Simple'
Installing /home/cpanrun/build/5.8.0/lib/site_perl/5.8.0/CompBio.pm
Installing /home/cpanrun/build/5.8.0/lib/site_perl/5.8.0/CompBio/DB.pm
Installing /home/cpanrun/build/5.8.0/lib/site_perl/5.8.0/CompBio/Simple.pm
Installing /home/cpanrun/build/5.8.0/lib/site_perl/5.8.0/CompBio/Simple/ArrayFile.pm
Installing /home/cpanrun/build/5.8.0/man/man1/dbaccess.1
Installing /home/cpanrun/build/5.8.0/man/man1/get_def.1
Installing /home/cpanrun/build/5.8.0/man/man1/get_seq.1
Installing /home/cpanrun/build/5.8.0/man/man1/tbl_to_fa.1
Installing /home/cpanrun/build/5.8.0/man/man1/fa_to_tbl.1
Installing /home/cpanrun/build/5.8.0/man/man1/dna_to_aa.1
Installing /home/cpanrun/build/5.8.0/man/man3/CompBio::DB.3
Installing /home/cpanrun/build/5.8.0/man/man3/CompBio::Simple::ArrayFile.3
Installing /home/cpanrun/build/5.8.0/man/man3/CompBio::Simple.3
Installing /home/cpanrun/build/5.8.0/man/man3/CompBio.3
Installing /home/cpanrun/build/5.8.0/bin/dbaccess
Installing /home/cpanrun/build/5.8.0/bin/get_blast
Installing /home/cpanrun/build/5.8.0/bin/get_seq
Installing /home/cpanrun/build/5.8.0/bin/get_def
Installing /home/cpanrun/build/5.8.0/bin/get_org
Installing /home/cpanrun/build/5.8.0/bin/ig_to_tbl
Installing /home/cpanrun/build/5.8.0/bin/fa_to_tbl
Installing /home/cpanrun/build/5.8.0/bin/tbl_to_fa
Installing /home/cpanrun/build/5.8.0/bin/dna_to_aa
Installing /home/cpanrun/build/5.8.0/bin/tbl_to_ig
Appending installation info to /home/cpanrun/build/5.8.0/lib/5.8.0/i686-linux-thread-multi/perllocal.pod